Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01455 ATGAAAACCCCACCTTCCATGGCTTTGAAAGAAAAGAAGAAGCCCGCCACAAAAAACAAGATCAACGGCACCGTCATTACCAACGATGGCAACAACACTAACAATAAAGAACTTCATTACAGGGGCGTCCGTAAGAGGCCATGGGGCCGTTACGCCGCCGAGATCAGGGATCCGGGTAAGAAGAGCCGCGTTTGGCTTGGAACATTCGACACCGCCGAAGAAGCTGCCATGGCTTATGACGCTGCCGCAAGACAGTTCCGTGGCTCCAAAGCCAAGACCAACTTCCCACTCGCTTCTTCTTCGCCCTCTCCCAACGAAAACGCCAACCTCAACATCAACAAGAATAATAGCGCCGGCGAGAGTCCTAGCCAGAGCAGCACTGTTGAGTCATCAACACCGGAGCGTGAGGTCACGCGCCGCCGCGACGTCACGGTGATTGAGCGGTTTCCGTTCCTTCCGTTGCAGCAGCCACTTCCGCCGCCGCATCATCAGCTCATGCCGTTTGGCGTTGCCGGCGGTACGGTTGTTGATGGTGTGGTGGCTCCCGTACGGCCGGTTTTCTTTTTAGATCCAACCGTCGGTCGGGCTGAGTTCTTTGGGCAAAGCTTTCCCGTACGGTTCGAACCGGGTCCATACGAGATTAGGACCGGGTTTGGAAGTTCGGCACATAGTGACTCGGATTCTTCCTCCGTCGTTGATTGCCAGCCCAAGAGAGAGCTCAATCTCGATCTCAACCTAGCTCCGCCAATGGATGCTTAA 759 0.5494 MKTPPSMALKEKKKPATKNKINGTVITNDGNNTNNKELHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAMAYDAAARQFRGSKAKTNFPLASSSPSPNENANLNINKNNSAGESPSQSSTVESSTPEREVTRRRDVTVIERFPFLPLQQPLPPPHHQLMPFGVAGGTVVDGVVAPVRPVFFLDPTVGRAEFFGQSFPVRFEPGPYEIRTGFGSSAHSDSDSSSVVDCQPKRELNLDLNLAPPMDA 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01455 252 Gene3D AP2/ERF domain 39 98 IPR036955 GO:0003700|GO:0006355
Adu03g01455 252 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Adu03g01455 252 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Adu03g01455 252 MobiDBLite consensus disorder prediction 93 132 - -
Adu03g01455 252 MobiDBLite consensus disorder prediction 1 37 - -
Adu03g01455 252 CDD AP2 39 96 IPR001471 GO:0003700|GO:0006355
Adu03g01455 252 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Adu03g01455 252 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 27 135 - -
Adu03g01455 252 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 170 235 - -
Adu03g01455 252 MobiDBLite consensus disorder prediction 93 140 - -
Adu03g01455 252 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4-LIKE 27 135 - -
Adu03g01455 252 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4-LIKE 170 235 - -
Adu03g01455 252 MobiDBLite consensus disorder prediction 1 18 - -
Adu03g01455 252 SUPERFAMILY DNA-binding domain 39 97 IPR016177 GO:0003677
Adu03g01455 252 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Adu03g01455 252 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Adu03g01455 252 MobiDBLite consensus disorder prediction 20 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01455 Adu-Chr3 21939689 21940994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01455 32 250 AP2-EREBP Transcription Factor Family AT5G44210 47.748 6.05e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu03g01455 AP2 2.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01455 K09286 - gmx:100801924 214.157