Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01442 ATGGATCAATTGGGAAGTAGAAGTGAAGCTTCTCCATCTTCAACCAACGACAAGAAGATTGAGAGAAGGCTCATTGAGAAAAAGAGAAGGAACCACATGAGGATGCTCTACTCCAAACTCAACTCTCTTCTCTCTATGGACCACAACTCCATTAGTCTCAAGCGCTGCCATTGGCTGATCGATCAAGTGGATAAGGCCATAAACTATATAAAAAATTTAGAGGAGAAGGTGAAGATGGCTAAGGAGAAGAGAGAGAGCTTGTTAGGAATGGGAAGAAACAGGACACGTGGCGCTGGCGGCCTTCGTGATCTCTCGAAACCGCCACAGCTAATGGTTCATGAAATGGGTTCATATCTTCAAATTGTAATGACATGTGGATTAGATTCCCAGTTCATATTCTCTGAAATCATTCGTATTCTGAATGAAGAGAACATTGATGTCAAGAGTGTCAAATCCTCACTCGTCGAAAATTCCATGCACCATGTTGTTCATGCAGAGATTTCACAATTTTTGCTTCAGTTGGGTGCAACTAAAGTAAGTGAGAGATTGAAAAGGTTTGTGAATGAACCAACCAGTGAAATTGAATTACAATCTGATCATCAGTTATTGGATTTTGAGATTGATACTGATGAATTAGCGGAGCTTCTAGATTTTTTAGAAGagaaatga 669 0.3976 MDQLGSRSEASPSSTNDKKIERRLIEKKRRNHMRMLYSKLNSLLSMDHNSISLKRCHWLIDQVDKAINYIKNLEEKVKMAKEKRESLLGMGRNRTRGAGGLRDLSKPPQLMVHEMGSYLQIVMTCGLDSQFIFSEIIRILNEENIDVKSVKSSLVENSMHHVVHAEISQFLLQLGATKVSERLKRFVNEPTSEIELQSDHQLLDFEIDTDELAELLDFLEEK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01442 222 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 13 194 - -
Adu03g01442 222 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 13 194 IPR015660 GO:0003700|GO:0006357
Adu03g01442 222 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 88 IPR036638 GO:0046983
Adu03g01442 222 MobiDBLite consensus disorder prediction 1 22 - -
Adu03g01442 222 Gene3D - 9 96 IPR036638 GO:0046983
Adu03g01442 222 Coils Coil 63 90 - -
Adu03g01442 222 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 17 73 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01442 Adu-Chr3 21666167 21667585 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01442 12 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 30.890 2.81e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01442 - - adu:107478214 252.677