Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01427 ATGATTCAGTATGGTAAAGATTATGAATTTGATGCTCCAGTGAAGCTCCTAGAGAAACATCTACATGCTATGGCACAATCTGTTGATGAGCAACTTCTTGTTATTGCTTTCAATGATAAGCCTGTGAAGAATTTGAAGGGCTTGGCCACCATGATTGAGAACTGTGATGATGAGTTTCTAAAGTTTGATCTGGAATACCAACAGGATGTGACAGCAACTAAAAGAAATGAATTTGAGGATTATTTTTTGAAGCGAGAGTTGCTCATGGGAATATATGAGAAGGTTTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTACTGGTAGTGACATTCTTGCAAGGGCTAAAAATGGGACAGGCAAAACAGCTGCATTTTACATTCCTGCATTGGAAAAAATTGACCAGAAACAATCTATCCTGGCATAG 441 0.3832 MIQYGKDYEFDAPVKLLEKHLHAMAQSVDEQLLVIAFNDKPVKNLKGLATMIENCDDEFLKFDLEYQQDVTATKRNEFEDYFLKRELLMGIYEKVFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFYIPALEKIDQKQSILA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01427 146 Gene3D - 79 145 IPR027417 -
Adu03g01427 146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 140 IPR027417 -
Adu03g01427 146 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 67 143 - -
Adu03g01427 146 Pfam PDZ domain 33 70 IPR041517 -
Adu03g01427 146 Pfam DEAD/DEAH box helicase 101 139 IPR011545 GO:0003676|GO:0005524
Adu03g01427 146 Gene3D - 32 78 IPR046449 -
Adu03g01427 146 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 76 104 IPR014014 GO:0003724
Adu03g01427 146 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 6 67 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01427 Adu-Chr3 21359942 21362015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01427 78 139 Eukaryotic Initiation Factors Gene Family AT5G11200 46.774 4.18e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01427 K12614 - ahf:112717194 265.003