Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01421 ATGCCGCGTCTTCTTTGTGCTGCCTGTGGTCTTCCGTCAACGAATTCAACGCCACCGTTCCCACTGCCTGATCGCGACGCTTCTCTTCGTCCCTCTCTTGGACTACAAAAGACTCAGGAGAGTAAGCTTAGGAGGAGTGTTGATATTGTTGTTGGCACTCCAGGTCGCGTGAAGGATCATATAGAGAGAGAAAATATTGACCCGAGTCAGCTAAAGTTCCGTGTCCTTGATGAGGCTAATGAAATGCTCAGAATGAGTTTTGTTGAAGATGTGGAACTAATTCTAGGCAAGGTACAAGATGTTAGCAAAGTTCATACATTTCTTTTCAATGCTACTTTGCCAGACTGGGTTAAGTATGGCCCAGCTTATCCCAGACATTATACACTGTTACATGGAGGCCGAACAATTATATTTACTGAGAAAAAAGAGTCTGCTTCTGAGCTTGCCGGCTTATTGCCTGGAGCAAGAGCTCTACATGGTGATATACAGCAATCCCAACGTGAGGTCGTGGAAGTGACAGGTGTACTGACTGATGAGACAAAACTTAGTCATATTGTAGAATTGAATTTAGTGTACCATTCACTGAATTCAAATATGCTTGGAGTTGTTGTAGTTAGATATAAGTGA 627 0.4322 MPRLLCAACGLPSTNSTPPFPLPDRDASLRPSLGLQKTQESKLRRSVDIVVGTPGRVKDHIERENIDPSQLKFRVLDEANEMLRMSFVEDVELILGKVQDVSKVHTFLFNATLPDWVKYGPAYPRHYTLLHGGRTIIFTEKKESASELAGLLPGARALHGDIQQSQREVVEVTGVLTDETKLSHIVELNLVYHSLNSNMLGVVVVRYK 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01421 208 PANTHER DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21 132 170 - -
Adu03g01421 208 PANTHER DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21 37 118 - -
Adu03g01421 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 169 IPR027417 -
Adu03g01421 208 Pfam DEAD/DEAH box helicase 37 118 IPR011545 GO:0003676|GO:0005524
Adu03g01421 208 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 131 IPR014001 -
Adu03g01421 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 117 IPR027417 -
Adu03g01421 208 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 132 170 - -
Adu03g01421 208 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 37 118 - -
Adu03g01421 208 Gene3D - 27 120 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01421 Adu-Chr3 21237983 21240000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01421 43 114 Eukaryotic Initiation Factors Gene Family AT1G72730 41.667 1.24e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01421 K16911 - nnu:104610854 182.185