Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01417 ATGTCGCCTGAAACTTCGCACACGCGAAGGAAGCTCGCCCACACGAGGAATTCGCCTTCGCGAGAAATGCACGCTTATGCGAGACTCCAGCAAACTCCATTCCGAATTCGCTTCGTTCTTTTCGATTCTTTGAAGTCATTTAACAACTTTTGTGAGCTTTCTATTGGTTCAGTTTGTCTTGCTGATATTCAGACCAAGGGGCGAGGTCGGTCAAAGAATGTCTGGGAGTCTCCGTTAGGTTGTTTCCTGTTTTTCTTTACTCTACAAATGGAGGATGGGCGAATAGTTCCATTGGTGCAGCCTCAGAACAAGAGAATTGAAATAGACGTAGCTGAGTATGATACTATTAAGTATTGGAAACAAAGGGCCTTGGGTTTGGAGAAATTGCTTGAGGCAAGCATCCAGAGAGAGCAGATACTCCAAGACAAGTTGCTTGAAAGGATCAATAACATTGAGAGGGCAGCACAGATGATATTTTACAAGTCTTCGAAATTGCAGGTGCGAAAAAGAGAAATGATGGCCAAGATTCGGGAAGAGATTGCAGTTCAGAAAGCAAAGGAAACAGAACTAAACAAAACCATCCACATTACAGAGGAGACTATGAGAGCAAAACAAATGCTAGCCACAATGTCTCATGAGATAAGGTCTTCATTATCTGGGGTAGTTAGCATGGCTGAAGTTCTTTCTACCACAAAGCTTGATGGGGAGCAAAGACAGCTCTTAATAATTAGCATGGTTGAAGTTCTTTTCTAA 753 0.4276 MSPETSHTRRKLAHTRNSPSREMHAYARLQQTPFRIRFVLFDSLKSFNNFCELSIGSVCLADIQTKGRGRSKNVWESPLGCFLFFFTLQMEDGRIVPLVQPQNKRIEIDVAEYDTIKYWKQRALGLEKLLEASIQREQILQDKLLERINNIERAAQMIFYKSSKLQVRKREMMAKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSSLSGVVSMAEVLSTTKLDGEQRQLLIISMVEVLF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01417 250 CDD HisKA 204 241 IPR003661 GO:0000155|GO:0007165
Adu03g01417 250 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 101 155 - -
Adu03g01417 250 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 166 243 - -
Adu03g01417 250 Pfam Biotin/lipoate A/B protein ligase family 44 95 IPR004143 GO:0036211
Adu03g01417 250 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 101 155 - -
Adu03g01417 250 Coils Coil 134 154 - -
Adu03g01417 250 MobiDBLite consensus disorder prediction 1 21 - -
Adu03g01417 250 Gene3D - 162 247 - -
Adu03g01417 250 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 199 241 IPR036097 GO:0000155|GO:0007165
Adu03g01417 250 SUPERFAMILY Class II aaRS and biotin synthetases 29 90 IPR045864 -
Adu03g01417 250 Gene3D Bira Bifunctional Protein; Domain 2 27 105 IPR045864 -
Adu03g01417 250 MobiDBLite consensus disorder prediction 1 18 - -
Adu03g01417 250 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 166 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01417 Adu-Chr3 21207691 21211003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01417 166 243 Histidine Kinase Gene Family AT5G10720 82.051 1.00e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01417 - - lja:Lj5g3v0473540.3 135.576