Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01393 ATGAACGTGTTGCATGATTTAGATCCCCAGGAAAGGACACTCGAAGATGTGTCTGATTGTGTTTCTGATTCCGATGAATATTTTGGTGACAATTTCTATGATGACTGGGACAACAGAGCAATTAACGGGATTGCGGACCTCCAAACCGTGAAGTTTAAAGAGCTAACTGCAGATCAGATTCGAAGGCTTCCTTTTCCAGATCGATCGGTTGCCTTTTCATTCTACAACTTGTATGCTAAAATGAATGGTTTTTCTGCAAGGAAGAGTCAGATACGACGCAATGTGAACAATGATGTGACACAACAAGCATTTGTGTGCTTTAGACAGGGATTTAGAGATTTGTGCTCTGATAATGACGCCGCTCGACGCAAACGGGAACCAAAGCCTACAACTAGATGTGGATGTGGGACAGAGATGCGTGTGCATATACATGAGGAGACAGGCAGATGGATTTTCTTCCGGTGTATTTCCCAAATGAGATCCAGAGAAGCACAGTCTGATTTACAGTCAATTGTTGGAGACCTAGTACTACAAAGCCCGTTGCATGATTTGGAGAGGTCGGCAGCAAACATGCTCACCAGAGAGATATTTTTGTTATTTCGTCCAATGCTTTCGAGAGCTTGCACTTTGAAGATTCGTTCGTGCACGTACACACCAACTTTTGAGATTTACACGCTTTCACGTTCTGGAAGTTTGCATAAAGAGTGGCGCGTATCTCACTATCCGAATGAAGAAATATACAAGTGTAGTTGCATGAGGATGGAATCGCTTGGAATACCATGTGATCATGTTGTTGCCGTCCTTGTTCATCTTGATGCTACTAAGTTACCCAAGAGTCTCATTCTTGATAGGTGGTCCAAAAATGCACGTTCAAGGGTTCATGCATTCATGGATAATGGCCCTTTTTGCTGGGATTCAATGGTCACTTGCCGTAACTGGATGCTAAGCGATCTTTGCAGGGAGTTATGCCTTCTTGGTTCTGCTGGCGATGCTGAATTCTCCGAACTTAGGGATAAATTTCAGAATGAGATAGTACTTCTTAAGGAACAAAAAACAATCCAGAGACGCAGACATGGGCATCGTCGTTATAGTAATGCGTTGGAGGAGAACATTCATCATGTTGAGAGCCCCCAAGACGATTGTTATAGGCCGGATTGGACGGATGTGGAATACACTAGTTTCTTTTGGGATGGTGATGGTGGCAGTGACAACTTTGACATGGAGATCCCTGTCTCAAACCCATATTACAGTTCGCAACCCTAA 1263 0.4355 MNVLHDLDPQERTLEDVSDCVSDSDEYFGDNFYDDWDNRAINGIADLQTVKFKELTADQIRRLPFPDRSVAFSFYNLYAKMNGFSARKSQIRRNVNNDVTQQAFVCFRQGFRDLCSDNDAARRKREPKPTTRCGCGTEMRVHIHEETGRWIFFRCISQMRSREAQSDLQSIVGDLVLQSPLHDLERSAANMLTREIFLLFRPMLSRACTLKIRSCTYTPTFEIYTLSRSGSLHKEWRVSHYPNEEIYKCSCMRMESLGIPCDHVVAVLVHLDATKLPKSLILDRWSKNARSRVHAFMDNGPFCWDSMVTCRNWMLSDLCRELCLLGSAGDAEFSELRDKFQNEIVLLKEQKTIQRRRHGHRRYSNALEENIHHVESPQDDCYRPDWTDVEYTSFFWDGDGGSDNFDMEIPVSNPYYSSQP 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01393 420 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 56 157 - -
Adu03g01393 420 Pfam FAR1 DNA-binding domain 73 152 IPR004330 -
Adu03g01393 420 ProSiteProfiles Zinc finger SWIM-type profile. 236 272 IPR007527 GO:0008270
Adu03g01393 420 SMART 26again6 247 274 IPR006564 GO:0008270
Adu03g01393 420 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 56 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01393 Adu-Chr3 20749658 20752247 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu03g01393 FAR1 9.3e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01393 - - adu:107466227 520.776