Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01385 ATGGGTAATGCTGTGGCAGGGTTAGCAGCTGACGGTAGGCAAATTGTTACGAGGACCAAGTCTGAAGTAACTAACTATGACAGATTGAATGTCATGATTGAATCACTATGGGATAAGAGAATTAGTGTAGCAGTGTTGAATGGACTTGAACCTATTCCTGTTAAGGAACTTGCTGAACGCGTGGCTAGTTATGTGCACCTTTGCACACTGTACTGGTGGCTCAGACCTTTTGGATGTGGTGTCATACTAGGAGGTTATGACAGAAATGGACCACAATTGTACATGGTTGAACCTTCTGTTGTTTCCTATAGATATTTTGGTGCTGCAATTGGGAAAGGGAGGCAAGCTGCGAAAACGGAGGTTATCCTCCTTTCGATTTCCATTGTTGGCTTTCTCTTGGCTTTTAGGGTATGTAAAAGACGACCATGGCGAGCATTTTTTTTATATGGACCACCTGGAATAGTTTACATGGTAAATTTCCCTTGCTGCTCTTCCCTCTGTTACTATATTAATAAGGTTCAAGCAAACTCAGATCAGGCTATGGTTTGGAATCAGCTCAAAGCAGGATCCTTCCAGTTCAATGAAGAAATGATGGAGTCGCTTTTTGGATATAATGCTGCTCAAGAAAAATCTAAACCTGGAATGAAGAAAGAATCTCGTGAACAAACTCCTCAATATATTCAGATCATTGAACCAAAGAAAGCAAATAATTTGTCAAATAATGAGCCTTTTAACCTTTAA 741 0.4022 MGNAVAGLAADGRQIVTRTKSEVTNYDRLNVMIESLWDKRISVAVLNGLEPIPVKELAERVASYVHLCTLYWWLRPFGCGVILGGYDRNGPQLYMVEPSVVSYRYFGAAIGKGRQAAKTEVILLSISIVGFLLAFRVCKRRPWRAFFLYGPPGIVYMVNFPCCSSLCYYINKVQANSDQAMVWNQLKAGSFQFNEEMMESLFGYNAAQEKSKPGMKKESREQTPQYIQIIEPKKANNLSNNEPFNL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01385 246 Pfam Proteasome subunit 50 120 IPR001353 GO:0005839|GO:0051603
Adu03g01385 246 Gene3D Formin, FH2 domain 167 241 IPR042201 -
Adu03g01385 246 Pfam Formin Homology 2 Domain 172 238 IPR015425 -
Adu03g01385 246 SUPERFAMILY Formin homology 2 domain (FH2 domain) 170 239 - -
Adu03g01385 246 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 122 IPR029055 -
Adu03g01385 246 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 120 IPR029055 -
Adu03g01385 246 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 2 124 - -
Adu03g01385 246 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 2 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01385 Adu-Chr3 20527366 20530971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01385 168 239 FH2 protein (formin) Gene Family AT5G54650 51.389 2.53e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01385 K02727 - adu:110278448 183.726