Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01382 ATGGAAGAAGGAAAAGAGGATGACGACGACAGCAACGGTCACAGAGAAGAGAAGAAAGCTAAATCGACAGAGAAAAAAGAGAGGAATAAGACGACGGTAGCGATGCAGCCGTTTCTTCGCCGGTGGGTGCTGCAAATGAAGGATGAAGTGGCGCAGGAAAACTCAAATCATGTTGGGACTGGAATCTTAGTGCATGTTTCTCCTGTAACTAATGGAAACTCAACTTATTCTATCCAGTCATATGCAATTGATTATGAATCATATAAAAAGCTCCTCAAAATACTGTACCCAGACAGGCAACAAGGAGAAAGAACAGTGACAACAGTAGGTGGTGTTATTGCCGAAGAACAATTGGAGATAAAGTGGATGATATCACAAAATGGTAGCCTGATTCCTAGAAATTCTTTACCAAAAGAATGCACAACCAATACTAAAAGTTTTGGGGCTTGGTTCAAAGTTGGAGAGAAAAATGGAAGGAAATTGAGCAGCTCACCAGTGAGATTCCATGATGTGAATTCCATGTCACTAGCGTTCAGTGTTCTTGAGGATCTTATTGAGCTTTTACGTAGCAAAAGTAGCCTCATTGAAGAGGCTGGGAGCTTGCAATGTCTCCAATCAAATTATTATGGGTTAAATTTTGTTATTTCTAGCATAAATCCCATCTCCAAAGATGTTCTCGACTTGAAGAAGCTTGGTGTCAAAGGTGTAATCACTCTTAGTGAACTGTATGAAACTTTGGTGCCATCATCTTTGTATGATTGCTGGATGTCTTCCTACCTCTTACTTGGAGTCTTGGAGAAAGAGTTCTGGAAAGAAATTGCTTGCGGGAAAATGGAAACAGTTCAATATACATGTGATGTTGATGCAGTGCCTTCTCATCTCCTTCTGATCAGCTTGGTAGCAAAACTTTTCTGGTTGCCGAAATCTGCATGGCGGCTCTTGGAATCATCTATTCCAGGAGTAACTGAACCCATGTTGTGCATTGGAATGCTATTTAAATTAATTATCATCATTGTGGGGCATCAAAATGATATTCCAGGTTATGCAGCATTGGACTTTGAAAGGGTGGGTGTAATGGATGTTGACTTGGAACCACTTAGTTTACAAGACAACGTCGAAAATTGCATGATGACTGGTGTGGAAGAAAATGTTAACTGCACTTGTGATTGCGGAGGCAGCAGTAGTAAGTGTGTGTCTATGACGGCCGATGATATTATAAACCAGACCTTTGAAACATTGGGTGCAACTTATAACTTGTACGTACGTTATGCGAGGTGTCTCAGATTTGGAGTTCGCAAGAGTGATACAGCATGTGGAAAAGATGGAACACAGCGCAGAAGGAGGTTTCTTTACAGCAAGGAAGGAAATAGACCCGAGAAATGCATATCTAATTCGAGTAGGAATAAGGAGCATAGAGCACTGACTTGCACTGTTATTTGA 1440 0.4097 MEEGKEDDDDSNGHREEKKAKSTEKKERNKTTVAMQPFLRRWVLQMKDEVAQENSNHVGTGILVHVSPVTNGNSTYSIQSYAIDYESYKKLLKILYPDRQQGERTVTTVGGVIAEEQLEIKWMISQNGSLIPRNSLPKECTTNTKSFGAWFKVGEKNGRKLSSSPVRFHDVNSMSLAFSVLEDLIELLRSKSSLIEEAGSLQCLQSNYYGLNFVISSINPISKDVLDLKKLGVKGVITLSELYETLVPSSLYDCWMSSYLLLGVLEKEFWKEIACGKMETVQYTCDVDAVPSHLLLISLVAKLFWLPKSAWRLLESSIPGVTEPMLCIGMLFKLIIIIVGHQNDIPGYAALDFERVGVMDVDLEPLSLQDNVENCMMTGVEENVNCTCDCGGSSSKCVSMTADDIINQTFETLGATYNLYVRYARCLRFGVRKSDTACGKDGTQRRRRFLYSKEGNRPEKCISNSSRNKEHRALTCTVI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01382 479 MobiDBLite consensus disorder prediction 8 31 - -
Adu03g01382 479 PANTHER LYSINE-SPECIFIC DEMETHYLASE 264 334 - -
Adu03g01382 479 MobiDBLite consensus disorder prediction 1 31 - -
Adu03g01382 479 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN 264 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01382 Adu-Chr3 20476970 20488145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01382 213 282 Protein tyrosine phosphatase (PTP) family AT2G35680 41.667 1.04e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01382 - - ahf:112715498 194.897