Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01377 ATGGTGGGAACATTATGGAGATTTACTCCTCGTTTTGAGCATCAACAGCTGCCACCACCATCATCATTATTATTATCATCGTGCAGCAGATCCAACTTTGTCAATGGCTTATCTGAAGGCTCAGAAAATAAGGCCTACTTCAAAAGGTATCAAATGAAGTTTAAGAGAAGAAGAGAGAAAAAGACTGACTACCGGGCCAAGATTCGGTTGATTCACCAAGATAAGAACAATCGGAGACGACTCCAAGCCCCTCATCGCCTCTCTTACTCCCTCCTTCAATGTGCCACCAACTCCTTTTCTTCCCCACTTGGCCATGACGACTTCGGCACCATCTTCTCCAGCACCCTTCCTCCTTCGGTAAGAACCCCTATTGTAATGAAGCTCATGGAACAACAACCCCGCAGCAAGGTGAGCGGGATTTCCACAATGAGCTCTTCTTTGCTTCTGTGCTCCACTAATCTCCCAACATCATCGCTGTGGAAGTTTGGACTTGCCCGTTTGAAGTCAAATCCTAATTTGGATGTTTTGGATGGTGGGGTTGATTTTGAGAAGAAAACGAGGGTTTTTTGGAGTGTGATGGTGGTTGTTATTGTCGTTGATGATTGTGAAACAAAACTAAAGAAGAAGGCAAAAAGAAGGAGGAAGGAGGATGGGGAAGGCTAG 663 0.451 MVGTLWRFTPRFEHQQLPPPSSLLLSSCSRSNFVNGLSEGSENKAYFKRYQMKFKRRREKKTDYRAKIRLIHQDKNNRRRLQAPHRLSYSLLQCATNSFSSPLGHDDFGTIFSSTLPPSVRTPIVMKLMEQQPRSKVSGISTMSSSLLLCSTNLPTSSLWKFGLARLKSNPNLDVLDGGVDFEKKTRVFWSVMVVVIVVDDCETKLKKKAKRRRKEDGEG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01377 220 Pfam Ribosomal large subunit proteins 60S L5, and 50S L18 48 77 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Adu03g01377 220 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Adu03g01377 220 Gene3D - 39 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01377 Adu-Chr3 20280928 20283514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01377 41 76 Cytoplasmic Ribosomal Protein Gene Family AT5G39740 75.000 1.06e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01377 K02932 - gmx:100785668 65.0846