Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01366 ATGGCGAATGGAGAGAGTGGGGTAGTGGCAGCAATCTTCAGTGAGGATGAGCTGAGTGAGGTGAGTGGCGTGAAGCGAGTTGGTGACTATGTTGAAATCACGTGCGGTTGTACTAGCCACAGGTATGGTGATGCTGTTGGAAGGCTTAGGGTTTTCGTTAATGGCTACCTTGAAATCACTTGTGAATGCACCCCTGGTTGCCAAGAAGACAAGTTGAGTCCTTCTGCATTTGAGAAACACTCTGGAAGAGAAACAGCTCGAAAGTGGAAGAACAACATATGGGTAATAGTGAAGGGTGAGAAGGTGCACAGTGGAAATGTTCTGATCTCCAATATGACAAAATTACATGTGATGATGAAGAAGAACGAGGGAGCCGCAGAGTATACAGGGGATGCACTCGCTCTCCGACATGCAAAGGTTGCACCTCCTGTGTCTGCTTCGGCTGCAGTATCTGCCGCTTTTCAGATTGCAGCTGCCAGACTTGTACTGACTTCACAAGCAATGTCAAAGTTTGATATTCATCCATCTTCTTCATATAGGCTTGTTTATGCCTATATCAATATTTTTAATTTTCTAATTGGACTCAACTTCCAGTCTGAATTCATCAATCATTGTTCTCATTGA 624 0.4439 MANGESGVVAAIFSEDELSEVSGVKRVGDYVEITCGCTSHRYGDAVGRLRVFVNGYLEITCECTPGCQEDKLSPSAFEKHSGRETARKWKNNIWVIVKGEKVHSGNVLISNMTKLHVMMKKNEGAAEYTGDALALRHAKVAPPVSASAAVSAAFQIAAARLVLTSQAMSKFDIHPSSSYRLVYAYINIFNFLIGLNFQSEFINHCSH 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01366 207 Pfam SAND domain 61 121 IPR000770 GO:0003677
Adu03g01366 207 ProSiteProfiles SAND domain profile. 16 125 IPR000770 GO:0003677
Adu03g01366 207 PANTHER PROTEIN ULTRAPETALA 1 1 105 - -
Adu03g01366 207 PANTHER PROTEIN ULTRAPETALA 1 1 105 IPR020533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01366 Adu-Chr3 19997501 20000194 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Adu03g01366 SAND 3.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01366 - - adu:107477900 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01366 03 19997501 20000194 Adu03g01366 03 19997501 20000194 ECH