Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01344 ATGCGTTGGTCATCCTTCTATCACACAGCATCAAGGGTTTTTAATGAGTATCCCAGCTGGTCCAAGTCTGCTATTGTATGCACTGTTATCAGTAGTGGAGGCCTAGTGGCATATGGTGAAGCGGTACAAAGTGAGAATGTGAAAGAAGCCCCAAAAAAGAAAGTGGTGATTCTTGGAACTGGTTGGGCAGGAACCAGTTTTCTTAAGAGCATCAGAAGTTCATCTTATGATATCCATGTTGTTTCACCTCGTAACTATTTTGCATTCACCCCTTTGTTGCCAAGTGTCACTTGTGGCACTGTCGAAGCACGCAGCATTGTTGAACCCATTCGCAACATCTCAAGAAAGAGTGGTGTAAATATTGAATTCAGTGAAGCTGAATGCTATAAGATCGACCCGAAGAACAAGAAAGTTTACTGCCGTGCTGATCCAGAGAAAAAGATGGGTGGGATTGAAGATTTTTCCCTTGATTATGATTACCTTGTAATAGCCATGGGAGCACGTTCTAATACCTTCAACACACCTGGAGTTCAGGAACATGCTTACTTCTTGAAGGAAGTGGATGATGCTCTAAGAATCCGGCAAAAGGTGGTTGATCTTTTTGAGAAAGCAAGCATTCCATCCATATCTGATGAAGAGAAGAAGAAGCTTCTGAGTTTTGTGATTGTTGGAGGAGGCCCAACTGGGGTAGAGTTTGCTGCAGAACTTCATGACTTTGTTCATGAGGATCTTTCTAAACTCTATCCTTCTCTACAACGTTATGTCAATATCACTTTGCTGGAGGCCGGAGATCATATCTTAAACATGTTTGACAAGAGAATCACAGAATTTGCTGAAACAAAGTTCAAAAGGGATGGCATAGATGTGAAGTTAGGATCTATGGTTATCAAAGTAAGTGAGAGAGAAATCTCGGCCAAAGACAGAGTAAGCGGTCAAGTTGCTTCCATACCTCATGGAATGGTAGTTTGGTCCACCGGCGTCGGTCCTCGACCAGAAATAATTGAATTTATGAAACAAGTTGGCCAGAGTAATAGACGTGCATTAGCCACTGATGAATGGCTAAGGGTGGAGGGATATGACAACATCTATGCTTTAGGTGATTGTGCTACTATAAATCAGAGGAAAGTTATGGAAGATATATCATTGATATTCAGCAAGGCAGACAAGAAGAACAGCGGGAAGTTGGATCTGAAAGAGTTTCAAGGCGTTGTGGACGACATCATAGAGAGGTACCCTCAGGTGGAGATTTATTTAAAGAAGAACCAAATGAAAGATATTGCTACCTTGCTCAAGTTTTCTCAAGAGAGCTCAGTTACTGTTGACATTGAATCCTTCAAATCTGCACTTTCCAATGTTGATACTCAAATGAAAAATCTCCCTCGAACTGCTCAGGTAGCTGCTCAACAAGGAGCGTATCTTGCAGATTGTTTCAACCGTATGGAGATATGCGAGCGGTATCCGGAAGGTCCTCTTAGATTCAGGGGAACCGGACGCCATCGCTTTCATCCCTTCAGGTACAAGCATTTTGGACAGTTCGCTCCTCTAGGAGGAGAACAAACTGCAGCTCAACTTCCGGGAGATTGGATTTCAATTGGCCATAGCACTCAATGGTTGTGGTATTCTATATATGCTAGCAAACTAGTGAGTTGGAGAACAAGAGCATTGGTGGTATCTGATTGGGGAAGAAGATTCGTATTTGGGAGGGACTCAAGTCGAATCTGA 1722 0.4268 MRWSSFYHTASRVFNEYPSWSKSAIVCTVISSGGLVAYGEAVQSENVKEAPKKKVVILGTGWAGTSFLKSIRSSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRNISRKSGVNIEFSEAECYKIDPKNKKVYCRADPEKKMGGIEDFSLDYDYLVIAMGARSNTFNTPGVQEHAYFLKEVDDALRIRQKVVDLFEKASIPSISDEEKKKLLSFVIVGGGPTGVEFAAELHDFVHEDLSKLYPSLQRYVNITLLEAGDHILNMFDKRITEFAETKFKRDGIDVKLGSMVIKVSEREISAKDRVSGQVASIPHGMVVWSTGVGPRPEIIEFMKQVGQSNRRALATDEWLRVEGYDNIYALGDCATINQRKVMEDISLIFSKADKKNSGKLDLKEFQGVVDDIIERYPQVEIYLKKNQMKDIATLLKFSQESSVTVDIESFKSALSNVDTQMKNLPRTAQVAAQQGAYLADCFNRMEICERYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSTQWLWYSIYASKLVSWRTRALVVSDWGRRFVFGRDSSRI 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01344 573 PANTHER NADH DEHYDROGENASE 4 573 IPR045024 GO:0003954|GO:0006116
Adu03g01344 573 SUPERFAMILY FAD/NAD(P)-binding domain 52 271 IPR036188 -
Adu03g01344 573 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Adu03g01344 573 PANTHER - 4 573 - -
Adu03g01344 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 219 237 - -
Adu03g01344 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 55 74 - -
Adu03g01344 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 158 176 - -
Adu03g01344 573 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 377 IPR023753 GO:0016491
Adu03g01344 573 SUPERFAMILY EF-hand 333 459 IPR011992 -
Adu03g01344 573 SUPERFAMILY FAD/NAD(P)-binding domain 220 372 IPR036188 -
Adu03g01344 573 Gene3D - 427 572 - -
Adu03g01344 573 Gene3D - 42 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01344 Adu-Chr3 19762026 19766049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01344 1 573 Chloroplast and Mitochondria Gene Families AT4G21490 68.041 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01344 K03885 - gmx:100820044 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01344 03 19762026 19766049 Adu03g01344 03 19762026 19766049 ECH