Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01339 ATGGTATGTTCCCTTGGGATTGGAAGAATGGAAGTCATGGCAAGGTTTCTAGCTGGGAGTTTCTCCCAAACCATTGCAGATGACTTTGGCAGGTCAGCTGCTGAGTATATTTGCAGAGAACTACGTGAGGCAGATGAAGCAAATTTACTTGATGAAGAAGGAGTGTTTGGAAGTGCAGAAGGAGAAGGCCTTCTGTATTGGCACCACTTGGGGCACATGCTTATGATAGTTGATAATGAAGAATTTTATGAGCATGAGAGGCCACTGTCACTGAAGGATATCAGAAGCCTTATCATTATATTGAGACAGGCTTTATGGCAGCTGCTGTGGGTAAATCATACCACAAATCCTAATTCGTTGAAATCTGCTTCAGCCAATTCAGCTAGTAAGAGGCAGTCTGTTGAAGCTATTCAACAGAGGCTGCAAGATTGGAACAACAGGCGGCAGTTTACATCCCCCGATGATTTTCATGCTGATGGGGTGAATGACATTTTTATCTCCCAGGTTGGGACTCCAATTTGTATTCCTTCTAGAGACTTCATTGACATTGGCCGCATTGCCTCCATTGAAAATAACCACACGCCAGTTGATTATGCAAAGAAAGGGCCGAAAGGAGCTATTAAGGAGTCTTTGCAGTTTTTATACTCACCAGCATATTTAAGAGAGATTAGGAAGAAAGGGTTTAAGGGAGTTGAGAATGGGGATAATGCTGTTTTGGATTGTTTTTCACATGAACAAATCACAAAACTTGCATCACATGGGGATAATGGACATAATGGCATTTTCCCTCTGAATCCTAATTCATCCAATCTATATCAGAGGTTTCATGAAAACAGCATTGTCAATTGTATGCTAGAGTTGCAAAATTTAAAAAACAATCTTGTTCTAGGATTATGCAAGAAGCTTCAAGCTGCTGGATGGCCTATAGTTTTGCTATCAAGGGGGAACGGATCAGATAGAAATGTCACTGTTGATAATCTTGGCAAAGCCAGATTCAGAAGTTGTTGGTCTTCCTTGATGATGAGGTTTCTGAAGATATTCTTGTCGAGAGAGTAG 1056 0.4119 MVCSLGIGRMEVMARFLAGSFSQTIADDFGRSAAEYICRELREADEANLLDEEGVFGSAEGEGLLYWHHLGHMLMIVDNEEFYEHERPLSLKDIRSLIIILRQALWQLLWVNHTTNPNSLKSASANSASKRQSVEAIQQRLQDWNNRRQFTSPDDFHADGVNDIFISQVGTPICIPSRDFIDIGRIASIENNHTPVDYAKKGPKGAIKESLQFLYSPAYLREIRKKGFKGVENGDNAVLDCFSHEQITKLASHGDNGHNGIFPLNPNSSNLYQRFHENSIVNCMLELQNLKNNLVLGLCKKLQAAGWPIVLLSRGNGSDRNVTVDNLGKARFRSCWSSLMMRFLKIFLSRE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01339 351 Gene3D Translation factors 163 227 - -
Adu03g01339 351 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL6 71 168 - -
Adu03g01339 351 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 71 168 IPR044611 GO:0000209|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01339 Adu-Chr3 19678326 19682764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01339 166 208 Eukaryotic Initiation Factors Gene Family AT1G76810 79.070 3.10e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01339 K10589 - adu:107477912 265.774