Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01329 ATGGTGAGAGCTCCATACTTTGATGCGAATGGAATAAAGAAAGGTGCCTGGAGTGAAGAAGAGGATAAGAAACTTACTGCTTATGTTGAGAGATATGGTCACCCTAATTGGCGTCAACTCCCAAGGCTTGCAGGTTTGTTGAGATGTGGAAAGAGCTGCAGACTTCGTTGGATGAATTACTTGCGGCCAAATCTAAAGAGAGGGAACTACACCCAAAAGGAAGAGCAGCTTATCATGGATTTGCATAAACAACATGGAAACAAATGGTCACTGATTGCTGAAAATCTACCTGGAAGAACAGACAACGAGATCAAGAACTATTGGCATAGCCACCTGAAGAAGTTCCAAAACTGCAATGTGAACAACACAGCAAGTGATGATGATGATGATGATTTGAACAAGTCCAAGTCCAAGTCCAAGTCTTCTTCTCAGAATACCAAAGAACATGAAAGACCAAAAAGTGAAGTCCTTACTATTACTACTGTTGATGATAACGATGATGATTCACACCATATCTTGGAAAGTTCGTTATCCAATGTGACAACTGAGTCTTCCTATTCGTACACTGAAGAAGAAGAAGACAACAACAACAACAACAACAATAATGCATGGCTCTGCTTTTCCTCTGGTCATGAAGAAGAGTCAAATAGGGAAGAAGATAGGTTTGCTTCGTGGGGTGCAACAACTTTGTTTGATGAGTTTGGTTCCAGTTTTTGGACCGAACCATTTATTTCAGATGATGCTTTTAGTCAAGATTACAATTACATTTTGTATGATAGAGAAGATCCTTTTTTCATTTGA 801 0.3945 MVRAPYFDANGIKKGAWSEEEDKKLTAYVERYGHPNWRQLPRLAGLLRCGKSCRLRWMNYLRPNLKRGNYTQKEEQLIMDLHKQHGNKWSLIAENLPGRTDNEIKNYWHSHLKKFQNCNVNNTASDDDDDDLNKSKSKSKSSSQNTKEHERPKSEVLTITTVDDNDDDSHHILESSLSNVTTESSYSYTEEEEDNNNNNNNNAWLCFSSGHEEESNREEDRFASWGATTLFDEFGSSFWTEPFISDDAFSQDYNYILYDREDPFFI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01329 266 MobiDBLite consensus disorder prediction 127 157 - -
Adu03g01329 266 CDD SANT 69 112 IPR001005 -
Adu03g01329 266 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu03g01329 266 MobiDBLite consensus disorder prediction 174 201 - -
Adu03g01329 266 PANTHER MYB TRANSCRIPTION FACTOR 1 259 - -
Adu03g01329 266 CDD SANT 16 61 IPR001005 -
Adu03g01329 266 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 259 - -
Adu03g01329 266 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu03g01329 266 Gene3D - 7 67 - -
Adu03g01329 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Adu03g01329 266 Gene3D - 69 114 - -
Adu03g01329 266 SMART sant 13 63 IPR001005 -
Adu03g01329 266 SMART sant 66 114 IPR001005 -
Adu03g01329 266 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Adu03g01329 266 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu03g01329 266 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Adu03g01329 266 MobiDBLite consensus disorder prediction 124 201 - -
Adu03g01329 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01329 Adu-Chr3 19465174 19466818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01329 1 168 MYB Transcription Factor Family AT2G31180 51.479 3.85e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu03g01329 Myb_DNA-binding 8.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01329 K09422 - gmx:100781032 290.812