Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01328 ATGAATTTGATCAAGATTCATGGTTCCGTTACTTGCAGATGGTCTGCCATTGCTGCGGAACTACCTGGAAGAACTGATAACGAAATCAAGAACCATTGGCACACCACACTCAAGAAGCGCTTCCAAACCAATGAAGAAGAATCCAAACCCAAAGAAACTACTCAGATCTCAGCAGAGAGCAACACTACTACTACTTCACCATTATCACCATTGTCATCTTCAAGTGAATTTTCCTCCAGAACTTCCTGGGATCAAAGTCACAATAATAATAATAATAATAAGAACAATCTGGTTCTTGAAGACGACGATTTCGCTTTTCTGGATGGAAGTTTCTGGACAGAACCATATCTTGCTGAAATCTTGCATGAACAAGAAACAGTAGTAACAGTGCCTAGTAGTACTAGCAATGTGTTTGATCCTTGTGAAATCTCAGTGGCCAATGAAAATGAAGAGTTGGAATTATCATCCAACAACAGTACGTCAAGTTTGTTTGATCTGGAGAAAGAGTTTGGGAGCTTCTTGATTGAACCAACAATGATGGAAAGTTTTTGGACCCAGCCATGTGTGTCTGAATCTGATGACGTGTCCCACATTCCTTTTATGCCTCCATCATCTGAATACTTTACAACGCTGTGTGGGTCAGATCCTTGGAGCACTCCAAGTACTACTCATTTGTATGATCAACATCTTAGCTTATTCCATTGA 705 0.4014 MNLIKIHGSVTCRWSAIAAELPGRTDNEIKNHWHTTLKKRFQTNEEESKPKETTQISAESNTTTTSPLSPLSSSSEFSSRTSWDQSHNNNNNNKNNLVLEDDDFAFLDGSFWTEPYLAEILHEQETVVTVPSSTSNVFDPCEISVANENEELELSSNNSTSSLFDLEKEFGSFLIEPTMMESFWTQPCVSESDDVSHIPFMPPSSEYFTTLCGSDPWSTPSTTHLYDQHLSLFH 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01328 234 Gene3D - 1 66 - -
Adu03g01328 234 CDD SANT 2 37 IPR001005 -
Adu03g01328 234 SUPERFAMILY Homeodomain-like 3 43 IPR009057 -
Adu03g01328 234 Pfam Myb-like DNA-binding domain 3 36 IPR001005 -
Adu03g01328 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 41 IPR017930 -
Adu03g01328 234 PANTHER MYB-RELATED PROTEIN MYB4-LIKE ISOFORM X1 3 130 - -
Adu03g01328 234 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 130 - -
Adu03g01328 234 ProSiteProfiles Myb-like domain profile. 1 37 IPR001005 -
Adu03g01328 234 MobiDBLite consensus disorder prediction 40 95 - -
Adu03g01328 234 MobiDBLite consensus disorder prediction 54 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01328 Adu-Chr3 19389540 19390901 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01328 3 114 MYB Transcription Factor Family AT2G31180 42.982 1.70e-18 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu03g01328 Myb_DNA-binding 1.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01328 K09422 - gmx:778184 120.553