Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01324 ATGGTGAGAACCCCTCATCGGTGTGAGAAAAGTGGAGTGAGGAAAGGAACATGGACACCTGAGGAAGATTCCAAGTTGATTGCTCATCTCACTACGTTTGGTCACCCCACCAATTGGCGCCAACTACCCGGAGCTGCAGGTCTTGCAAGGTGTGGAAAGAGCTGCAGATTAAGGTGGATGAATTACTTAAGGCCAGATGTCAAAAGAGGGAATTATACACAAGAAGAAGATGACACTATAGTCAAACTACACAATCAGTTTGGTAATAGATGGTCCATGATTGCGTCTCACTTACATGGAAGATCAGACAACGAGATAAAGAATCGGTGGCACTCCCAACTTAAGAAGCGATTCCAACACACTTCAGCCTCCAATTCAAATAATCATAATGCCTTAATTCAATCAACGGAAGAAGAGATAGTGAATAATAATCATAATAATAATGCCACTACAAATGAATACCCTTCTAGTAATCTTCACAACACTTCTCCAGCTTCTTCTCAAAGCGATACATATGACGATTTTTCTCCATTGAGTGACTTTTTCTACACACCTGCGGTGGATCTTGCTGCACCATTTGGTAATAACTCGGTTTTGGGTATTGATAATGATGATCACTATGCTAATTTTCTGGATAATATGGTACACAGTAACATAGTGCCAATTGGTGCAGATTATGTTTGGACTCAACAGGATTATTCAAGTCCAATCTATGAGATCCGCGTTGCTGTCTTTGTTCTTCGTTCGTCTCAGATCTATGTCGCTACGACAGAACTAGCATCACTTTTATCTTCAAAAGCATCGTCAATGGCGGAAAGGAACTCCTCCTTCTCTGCATCTCCTCCAATTCTGGCGCTGCATGTTTGCGAAAAGGATTTTGATGAAATGGATAAGCGCTTGAAGGATATAGAAGATAAAACTACTGCTTTTAAAGAAATGCAAGCCAAGGTCAAGAAGGAGATGGAATCTGTTCAGGAATCGAATAGTGTGATAAATGGTGGTGGTGAGAGCAGCAATAATAATGATCAAGTTCCAAAGGTAGCGGATTTTCTTGGTGTGAGGAAGGCAGAGGAAGATTCATTGTCATCAAATCTTGTTGCCCTTACTACACACCTCTTCACCGTTGGAGTGCAAACATCTCAGATGCAAATGATGCCCACAAGCATTCAAATGTTCTTGTGGGAGAGTTTTGATGAAGATCCTTCTTCTATGGATGACAGCTCCACAATTACTGCTTCTGGTCTCTTGGAACAAATAAATGTTACACGGGATACAAGTGATTACCTTTGGTATACAACTAGGAAGGGATTTCGATATGGACATGATACGATCGTTGATGGTATGATCAAAGATGGCCTTTGA 1362 0.4112 MVRTPHRCEKSGVRKGTWTPEEDSKLIAHLTTFGHPTNWRQLPGAAGLARCGKSCRLRWMNYLRPDVKRGNYTQEEDDTIVKLHNQFGNRWSMIASHLHGRSDNEIKNRWHSQLKKRFQHTSASNSNNHNALIQSTEEEIVNNNHNNNATTNEYPSSNLHNTSPASSQSDTYDDFSPLSDFFYTPAVDLAAPFGNNSVLGIDNDDHYANFLDNMVHSNIVPIGADYVWTQQDYSSPIYEIRVAVFVLRSSQIYVATTELASLLSSKASSMAERNSSFSASPPILALHVCEKDFDEMDKRLKDIEDKTTAFKEMQAKVKKEMESVQESNSVINGGGESSNNNDQVPKVADFLGVRKAEEDSLSSNLVALTTHLFTVGVQTSQMQMMPTSIQMFLWESFDEDPSSMDDSSTITASGLLEQINVTRDTSDYLWYTTRKGFRYGHDTIVDGMIKDGL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01324 453 SUPERFAMILY Homeodomain-like 12 110 IPR009057 -
Adu03g01324 453 CDD SANT 17 63 IPR001005 -
Adu03g01324 453 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Adu03g01324 453 Gene3D - 70 146 - -
Adu03g01324 453 CDD SANT 71 111 IPR001005 -
Adu03g01324 453 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 170 - -
Adu03g01324 453 Coils Coil 286 306 - -
Adu03g01324 453 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Adu03g01324 453 SMART sant 14 65 IPR001005 -
Adu03g01324 453 SMART sant 68 116 IPR001005 -
Adu03g01324 453 Gene3D - 7 68 - -
Adu03g01324 453 MobiDBLite consensus disorder prediction 144 171 - -
Adu03g01324 453 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 63 IPR017930 -
Adu03g01324 453 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Adu03g01324 453 Pfam Myb-like DNA-binding domain 15 63 IPR001005 -
Adu03g01324 453 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 170 - -
Adu03g01324 453 ProSiteProfiles Myb-like domain profile. 10 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01324 Adu-Chr3 19210067 19215089 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01324 1 140 MYB Transcription Factor Family AT1G06180 57.143 4.03e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu03g01324 Myb_DNA-binding 1.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01324 K09422 - ahf:112789721 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01613 08 26731881 26732888 Adu03g01324 03 19210067 19215089 PCT
Adu03g01324 03 19210067 19215089 Adu08g01614 08 26768875 26771294 PCT