Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01320 ATGGTGAGAACCCCTCATCGGTGTGAGAAAAGTGGAGTGAGGAAAGGAACATGGACACCTGAGGAAGATTCCAAGTTGATTGCTCATCTCACTACGTTTGGTCACCCCACCAATTGGCGCCAACTACCCGGAGCTGCAGGTCTTGCAAGGTGTGGAAAGAGCTGCAGATTAAGGTGGATGAATTACTTAAGGCCAGATGTCAAAAGAGGGAATTATACACAAGAAGAAGATGACACTATAGTCAAACTACACAATCAGTTTGGTAATAGATGGTCCATGATTGCGTCTCACTTACATGGAAGATCAGACAACGAGATAAAGAATCGATGGCACTCCCAACTTAAAAAGCGATTCCAACACACTTCGGCCTCTAATTCAAATAATCATAATGCCTTAGTTGAATCAACGGAAGAAGAGATAGTGAATAATAATAATAATAATAATAATAATAATAATGCCACTATAAATGAATACCCTTATAGTAATCTTCTCAACACTTCTCCAGCTTCTTCTCAAAGCGATACATATGACGATTTTTCTCCATTGAGCGACTTTTTCTACACACCTGCGGTGGATCTTGCTGCACCATTTGGTAATAACTCGGTTTTGGCTATTGATAATGATGATCACTATGCTAATTTCCTGGATAATATGGTACATAGTAACATAGTGCCAATTGGTGCAGATTGTGTTTGGACTCAACAGGATTATTCAAGTCCAATCTATGAGGTACAACTTTGGGGTCTATAG 750 0.3973 MVRTPHRCEKSGVRKGTWTPEEDSKLIAHLTTFGHPTNWRQLPGAAGLARCGKSCRLRWMNYLRPDVKRGNYTQEEDDTIVKLHNQFGNRWSMIASHLHGRSDNEIKNRWHSQLKKRFQHTSASNSNNHNALVESTEEEIVNNNNNNNNNNNATINEYPYSNLLNTSPASSQSDTYDDFSPLSDFFYTPAVDLAAPFGNNSVLAIDNDDHYANFLDNMVHSNIVPIGADCVWTQQDYSSPIYEVQLWGL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01320 249 CDD SANT 17 63 IPR001005 -
Adu03g01320 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Adu03g01320 249 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 168 - -
Adu03g01320 249 CDD SANT 71 111 IPR001005 -
Adu03g01320 249 Pfam Myb-like DNA-binding domain 15 63 IPR001005 -
Adu03g01320 249 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Adu03g01320 249 Gene3D - 6 69 - -
Adu03g01320 249 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Adu03g01320 249 SMART sant 68 116 IPR001005 -
Adu03g01320 249 SMART sant 14 65 IPR001005 -
Adu03g01320 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 63 IPR017930 -
Adu03g01320 249 SUPERFAMILY Homeodomain-like 12 110 IPR009057 -
Adu03g01320 249 MobiDBLite consensus disorder prediction 135 157 - -
Adu03g01320 249 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 168 - -
Adu03g01320 249 ProSiteProfiles Myb-like domain profile. 10 63 IPR001005 -
Adu03g01320 249 Gene3D - 70 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01320 Adu-Chr3 19185657 19187441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01320 1 140 MYB Transcription Factor Family AT1G06180 57.857 1.80e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu03g01320 Myb_DNA-binding 4.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01320 K09422 - gmx:106799185 206.453