Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu03g01320 | ATGGTGAGAACCCCTCATCGGTGTGAGAAAAGTGGAGTGAGGAAAGGAACATGGACACCTGAGGAAGATTCCAAGTTGATTGCTCATCTCACTACGTTTGGTCACCCCACCAATTGGCGCCAACTACCCGGAGCTGCAGGTCTTGCAAGGTGTGGAAAGAGCTGCAGATTAAGGTGGATGAATTACTTAAGGCCAGATGTCAAAAGAGGGAATTATACACAAGAAGAAGATGACACTATAGTCAAACTACACAATCAGTTTGGTAATAGATGGTCCATGATTGCGTCTCACTTACATGGAAGATCAGACAACGAGATAAAGAATCGATGGCACTCCCAACTTAAAAAGCGATTCCAACACACTTCGGCCTCTAATTCAAATAATCATAATGCCTTAGTTGAATCAACGGAAGAAGAGATAGTGAATAATAATAATAATAATAATAATAATAATAATGCCACTATAAATGAATACCCTTATAGTAATCTTCTCAACACTTCTCCAGCTTCTTCTCAAAGCGATACATATGACGATTTTTCTCCATTGAGCGACTTTTTCTACACACCTGCGGTGGATCTTGCTGCACCATTTGGTAATAACTCGGTTTTGGCTATTGATAATGATGATCACTATGCTAATTTCCTGGATAATATGGTACATAGTAACATAGTGCCAATTGGTGCAGATTGTGTTTGGACTCAACAGGATTATTCAAGTCCAATCTATGAGGTACAACTTTGGGGTCTATAG | 750 | 0.3973 | MVRTPHRCEKSGVRKGTWTPEEDSKLIAHLTTFGHPTNWRQLPGAAGLARCGKSCRLRWMNYLRPDVKRGNYTQEEDDTIVKLHNQFGNRWSMIASHLHGRSDNEIKNRWHSQLKKRFQHTSASNSNNHNALVESTEEEIVNNNNNNNNNNNATINEYPYSNLLNTSPASSQSDTYDDFSPLSDFFYTPAVDLAAPFGNNSVLAIDNDDHYANFLDNMVHSNIVPIGADCVWTQQDYSSPIYEVQLWGL | 249 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu03g01320 | 249 | CDD | SANT | 17 | 63 | IPR001005 | - | |
Adu03g01320 | 249 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 64 | 118 | IPR017930 | - | |
Adu03g01320 | 249 | PANTHER | MYB-RELATED TRANSCRIPTION FACTOR | 1 | 168 | - | - | |
Adu03g01320 | 249 | CDD | SANT | 71 | 111 | IPR001005 | - | |
Adu03g01320 | 249 | Pfam | Myb-like DNA-binding domain | 15 | 63 | IPR001005 | - | |
Adu03g01320 | 249 | Pfam | Myb-like DNA-binding domain | 69 | 113 | IPR001005 | - | |
Adu03g01320 | 249 | Gene3D | - | 6 | 69 | - | - | |
Adu03g01320 | 249 | ProSiteProfiles | Myb-like domain profile. | 64 | 114 | IPR001005 | - | |
Adu03g01320 | 249 | SMART | sant | 68 | 116 | IPR001005 | - | |
Adu03g01320 | 249 | SMART | sant | 14 | 65 | IPR001005 | - | |
Adu03g01320 | 249 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 10 | 63 | IPR017930 | - | |
Adu03g01320 | 249 | SUPERFAMILY | Homeodomain-like | 12 | 110 | IPR009057 | - | |
Adu03g01320 | 249 | MobiDBLite | consensus disorder prediction | 135 | 157 | - | - | |
Adu03g01320 | 249 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 168 | - | - | |
Adu03g01320 | 249 | ProSiteProfiles | Myb-like domain profile. | 10 | 63 | IPR001005 | - | |
Adu03g01320 | 249 | Gene3D | - | 70 | 154 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu03g01320 | Adu-Chr3 | 19185657 | 19187441 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu03g01320 | 1 | 140 | MYB Transcription Factor Family | AT1G06180 | 57.857 | 1.80e-52 | 169 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Adu03g01320 | Myb_DNA-binding | 4.9e-10 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu03g01320 | K09422 | - | gmx:106799185 | 206.453 |