Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01307 ATGATGAAGAAGTGCGAACTGTGCAAGGTTAGGGCTAGGACTTTCTGCGAGTCGGACCAGGCTAGCTTATGCTGGACCTGCGACGCTAATGTTCACGGTGCTAACTTCCTTGTGGCTAGGCACTCCAGGACGCTCCTCTGCCGCGACTGTTACTCACTTACGCCGTGGAAAGCCACCGGCGCCGCACTCCTTAACGCCGTTTCCCTCTGCCACAGTTGTTCCAAGGGAGAACAAGAAAAACCAAAAGAAGAAGAGAGCGAAGGGGAAAATAACGACGCGACAGAAATCGACGACGACGACGACGACGGTTTCGAAGATGTGGACGGAGAAAATCAGGTTGTGCCTTGGTGCTCTTCCACCACCCCGCCGCCTCCGCCTTCGAGTTCCGCCGGCAGCGAAGAGTCGGAGTTCGGCGCTGGAGATGGTTTTGACCTGGCGACGTCGTTGAAACGACGGCGTGACGTCGACGCTTCGGATCGTGACCTTCAGGAAGCCTCGAACGCTTCGATTTGTGAGCGGCGGAGGATGGCAGAGGACCACCGCTGA 546 0.5714 MMKKCELCKVRARTFCESDQASLCWTCDANVHGANFLVARHSRTLLCRDCYSLTPWKATGAALLNAVSLCHSCSKGEQEKPKEEESEGENNDATEIDDDDDDGFEDVDGENQVVPWCSSTTPPPPPSSSAGSEESEFGAGDGFDLATSLKRRRDVDASDRDLQEASNASICERRRMAEDHR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01307 181 MobiDBLite consensus disorder prediction 77 181 - -
Adu03g01307 181 CDD Bbox1_BBX-like 4 46 - -
Adu03g01307 181 PANTHER - 2 177 - -
Adu03g01307 181 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Adu03g01307 181 Pfam B-box zinc finger 3 43 IPR000315 GO:0008270
Adu03g01307 181 SMART bboxneu5 1 46 IPR000315 GO:0008270
Adu03g01307 181 MobiDBLite consensus disorder prediction 146 181 - -
Adu03g01307 181 MobiDBLite consensus disorder prediction 88 108 - -
Adu03g01307 181 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01307 Adu-Chr3 18950234 18951493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01307 1 124 C2C2-CO-like Transcription Factor Family AT4G27310 40.854 1.06e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu03g01307 zf-B_box 2.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01307 - - gmx:100809520 155.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01307 03 18950234 18951493 Adu03g01307 03 18950234 18951493 ECH
Adu08g01609 08 26598613 26602648 Adu03g01307 03 18950234 18951493 PCT