Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01287 ATGAACTGTAGTAATGGATCACTCTATGAGGCACTCCACTCAGAGGATGAATTTAAAACAAGACTCACGTGGAATGCTCGCATCCGGATAGCACTTGGGGCGGCTAGGGCCCTAGAGTATTTGCATGAGCAAGAGCAATGTCAGCCGGCTGTGATTCACAGAAATTTCAAGTCTGCTAACATTCTTCGTGACAATGACCTATAa 204 0.4559 MNCSNGSLYEALHSEDEFKTRLTWNARIRIALGAARALEYLHEQEQCQPAVIHRNFKSANILRDNDL 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01287 67 Gene3D Transferase(Phosphotransferase) domain 1 2 67 - -
Adu03g01287 67 SUPERFAMILY Protein kinase-like (PK-like) 3 66 IPR011009 -
Adu03g01287 67 PANTHER OS01G0253100 PROTEIN 3 67 IPR045271 GO:0004714|GO:0006468
Adu03g01287 67 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 3 67 - -
Adu03g01287 67 Pfam Protein tyrosine and serine/threonine kinase 3 64 IPR001245 GO:0004672|GO:0006468
Adu03g01287 67 ProSiteProfiles Protein kinase domain profile. 1 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01287 Adu-Chr3 18577122 18578064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01287 3 67 Strubbelig Receptor Gene Family AT4G03390 67.692 6.40e-28 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Adu03g01287 PK_Tyr_Ser-Thr 9.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01287 - - ahf:112737625 110.538