Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01275 ATGTGCAAAGGTGCAGAAGAAAAAAAGCATGGTGGTGGTTTTTGTAGGAGCTTCACACATGAAGAGGGTGCATCATCACAACATCATCATCATCATGATGGTGGTTCAAAATCTTGTGAGCTATGTGGATTTCAAGCTTCATTGTATTGCCAAGCTGATGATGCTTATTTGTGTAGAGAGTGTGACAAATGGGTTCATAAGGCAAATTTCTTGGCACTTAGACACATAAGGTGTTTTTTGTGCAACACGTGTCACAATCTTACAAGGAGATGTCTCATTGGAGCTTCAATGGAGGTCATTCTTCCAGCCACATTAATTGAGAACCTTTCTAACAACAACAATAGCAGGGATTGTTCAAGAACACAAGACACCCCTTTCAAGTTTCTCTAA 390 0.4 MCKGAEEKKHGGGFCRSFTHEEGASSQHHHHHDGGSKSCELCGFQASLYCQADDAYLCRECDKWVHKANFLALRHIRCFLCNTCHNLTRRCLIGASMEVILPATLIENLSNNNNSRDCSRTQDTPFKFL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01275 129 PANTHER B-BOX ZINC FINGER PROTEIN 29 36 118 - -
Adu03g01275 129 CDD Bbox1_BBX-like 39 80 - -
Adu03g01275 129 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 36 118 - -
Adu03g01275 129 SMART bboxneu5 34 80 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01275 Adu-Chr3 17784068 17784636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01275 1 129 C2C2-CO-like Transcription Factor Family AT3G21890 41.007 1.40e-28 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu03g01275 zf-B_box 1.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01275 - - gmx:100305571 156.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01275 03 17784068 17784636 Adu03g01275 03 17784068 17784636 ECH
Adu08g01583 08 26266437 26267173 Adu03g01275 03 17784068 17784636 PCT