Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01274 ATGGAATTTGAAACACTATGTGAGTGCTGTGGGGTTGCAAGAGCCATTGTTTATTGCAAATCAGATTCTGCACGTTTGTGCATGGATTGTGATGTGTCCGTACACAGTGCAAATTGTTTATCTATGAGGCACCTTCGTTCTCTCTTATGTGACAGGTGCAATTCCGAAGCAGCAATTGTTCATTGCATTGAGGAAAAGTTGTCATTTTGCCAAGGTTGTTGTGAATTGAACCAAAATGGGTGTTCAATTTTGGGACACAGGCTTCAATCCTTGAATTGTTACAAAGGTTGTCCCAATTTCACTGATTTGCCTGGCTTGTTCTCCTTTGTTCTCGATGATTATTCCTGTTCAAGTGGTTTGGACCATAATGGTGGCGGCAGCGGATCAATTGACACATCATTGCCTAGAAGTGAAAGCTGCAATAGCAAGTGTTTGGAGCAGCTTGTTAACACTATTAACAATGATGGCAATTTCGGTTTTGTTAATGAAAAGTTGAAGGAAACAGAATACTCTGGTGACCAAGCAATCTTCCTTCCAAACCTTCCAAAGCTGCAGGAATGTCCAAATTTGAACGATCTAGGAATCCATGATGGTGATGGTCTCAACATGGATAATTTTCAATTTAACTTTGAAAACACTGATGAAATATTTGACTATTCTCAAATTGATACAACATACCAAGTTGTTAATGGAGGAATGGACTGTGAATTAATGGGAAATAACATATCAGCAACAGAATCTAATGCTCTTTTCGAGAGTACAATAGAGGCTGGTGGATCAGCTAGCGAGATGTATGGAATCAACAGCAATGAGAATTGTGTGCTTATGCCTCCTAGCTGCAATGAAAACAGCAATCTGGGATTCTCAAAGGGTGGTCAACTCTATTCAAGCATGTCACTTCCACTTCCTAACGGCGAGAGTGAAATTGGTGCTACAGATTATCAAGATTCTGGTTTGTCATCGATGTTCCCGATGGGTGATTTGTCTATGGAACCAATCTCAAAGGGTACATGCCAGCAAGCTCGGGAGAAAGCAAAATTGAGATTAAATGAGAAAAAGAAAAATCTAAGGTTTGGTAAGCAAATAAGATATGAATCTCGCAAAGCAAGGGCTGATTCGAGAAAACGTGTGAAAGGTAGATTTGTGAAAGCAGGCGAAGCATATGATTACGATCCTAAGAAGACAAGGAGCCTCTAA 1197 0.401 MEFETLCECCGVARAIVYCKSDSARLCMDCDVSVHSANCLSMRHLRSLLCDRCNSEAAIVHCIEEKLSFCQGCCELNQNGCSILGHRLQSLNCYKGCPNFTDLPGLFSFVLDDYSCSSGLDHNGGGSGSIDTSLPRSESCNSKCLEQLVNTINNDGNFGFVNEKLKETEYSGDQAIFLPNLPKLQECPNLNDLGIHDGDGLNMDNFQFNFENTDEIFDYSQIDTTYQVVNGGMDCELMGNNISATESNALFESTIEAGGSASEMYGINSNENCVLMPPSCNENSNLGFSKGGQLYSSMSLPLPNGESEIGATDYQDSGLSSMFPMGDLSMEPISKGTCQQAREKAKLRLNEKKKNLRFGKQIRYESRKARADSRKRVKGRFVKAGEAYDYDPKKTRSL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01274 398 CDD Bbox1_BBX-like 6 49 - -
Adu03g01274 398 ProSiteProfiles Zinc finger B-box type profile. 2 49 IPR000315 GO:0008270
Adu03g01274 398 PANTHER CCT MOTIF FAMILY PROTEIN-RELATED 6 393 - -
Adu03g01274 398 Pfam CCT motif 342 384 IPR010402 GO:0005515
Adu03g01274 398 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 6 393 - -
Adu03g01274 398 SMART bboxneu5 2 49 IPR000315 GO:0008270
Adu03g01274 398 ProSiteProfiles CCT domain profile. 342 384 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01274 Adu-Chr3 17778158 17780230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01274 3 392 C2C2-CO-like Transcription Factor Family AT3G21880 40.302 4.43e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu03g01274 CCT 1.7e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01274 - - ahf:112737556 795.808