Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01251 ATGTTTGTTTGGGAGGCATTGCATGACTTAACACTAATCATTCTCATAGTTTGTGCTCTAGTTTCTATAGCTATAGGGCTTCCCACTGAAGGATGGCCAAAGGGTGTTTATGATGGTCTTGGTATCATACTTAGTGTGTTTTTGGTTGTTACTGTTACTGCTATTAGTGACTACCAGCAATCCTTGCAATTCAGGGATTTGGACAAAGAGAAGAAAAAGCTCTTTGTCCAGGTGACCAGGGATGGGAAGAGACAGAAGGTTTCTATTTACGATTTGGTAGTCGGAGATATTGTCCATTTGTCAACTGGTGATCAAGTTCCAGCTGATGGAGTTTTTGTAACTGGATACTCATTACTAATTGATGAATCAAGTTTGTCAGGTGAGAGTGAACCAGTAAATATAGATGAACAAAAACCTTTTCTTCTTGCGGGAACCAAAGTGCAGGATGGTCAGGGAAAGATGATAGTTACAACAGTTGGCATGAGGACTGAATGGGGGAAGTTGATGGAAACTTTAAGTGAGGGAGGTGAGGAGGAGACTCCATTGCAAGTGAAATTGCATGGAGTTGCAACAATTATTGGGAAAATTGGGTTGGCTTTTGCCGTGTTGACATTTATCGTGTTGACAATAAGGTTTCTTGTTGAGAAAGCAGTCTCTGGTGACTTTAGTAGTTGGTCTATGAATGATGCAATGAAACTGCTGGACTACTTTGCTATTGCAGTGACCATAATAGTTGTCGCAATTCCGGAAGGATTACCATTAGCTGTGACACTTAGTCTTGCTTTTGCAATGAAAAAATTAATGAATGACAAGGCACTTGTGAGACATCTTTCCGCATGTGAGACTATGGGTTCTGCAAGTTGCATTTGCACAGACAAGACAGGAACATTGACCACTAACCATATGGTTGTGAACAAGATTTGGGTATGCGAAAAAGAGGCCGAGATCAAAGGTAATGAGAGTGCAGAGAAGCTGAAAACAGAGATACCTGAGGAAGTAATGAACATCCTTTTGCAGGCTATATTTCAAAATACATCTTCTGAAGTAGTTAAGGATGAAACCGGTAATAACACAATATTGGGAACACCAACAGAATCAGCATTGTTGGAATTTGGTTTGCTCACAGGTGGTGATTTTGATGCACAGCGCAGTACCTATAAGATAATTAAGGTTGAGCCTTTCAATTCAGTTCGGAAGAAGATGTCTGTGCTTGTGAGTCTTCCTAATGGAGGAGTCAGAGCTTTCTGCAAAGGAGCATCAGAAATAATACTAAGAATGTGTGACAAAATTATTGATTCTAATGGAAATGCTGCTGATCTTCCTGAAGAACAGGCGAAAAAAGTTAATGATGTCATAAATAATTTTGCCTCTGAAGCTCTGAGAACTCTTTGTTTGGCTGTTAAAGATATAGACGCAACAGAAGGGGAAAGCAGTATCCCTGATCATGGCTATACTCTGATAGCAATTGTAGGAATCAAGGATCCTGTGCGGCCCGGGGTCAGGGAAGCTGTTCAAACTTGTTTAGCAGCTGGAATAACCGTCCGTATGGTGACCGGTGATAACATCAATACAGCTAGAGCCATAGCTAAAGAATGTGCTATACTCACCGAGGGTGGTGTAGCTGTAGAAGGACCAGAGTTTCGAAACTTGTCGCCGGAGCAAATGAGAGATATCATACCAAATATTCAGGTAATGGCACGTTCCCTACCGCTTGACAAGCACACTTTAGTATCCAATTTGAGGAATATGTTTGGTGAGGTTGTAGCTGTAACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGGCAGACATTGGACTTGCCATGGGGATCGCTGGAACTGAGGTTGCCAAAGAAAATGCTGATGTGATTATAATGGATGATAACTTCACTACTATCGTTAACGTGGCCAAATGGGGACGTGCCATATACATAAACATACAAAAATTTGTGCAGTTTCAGCTAACTGTAAATATTGTTGCTCTGGTTATCAACTTTGTTTCTGCATGCATCACTGGATCTGCGCCACTCACAGCTGTTCAGTTGCTTTGGGTAAATTTGATTATGGACACATTGGGTGCACTGGCTCTGGCTACTGAGCCTCCCAATGATGGACTAATGGAAAGACCCCCAGTTGGAAGAAAAGCAAGTTTTATCACCAAACCAATGTGGAGGAATATCTTTGGTCAGAGTTTGTATCAATTGATTGTCCTTGCACTTCTCACTTTTGATGGGAAGAGGCTACTGGGACTTACTGGTTCAGATGCAACTCAAGTGCTCAACACTTTGATCTTCAACTCCTTTGTATTTTGCCAGGTATTCAATGAGATAAACAGCAGAGAAATTGAAAAGATAAACATATTCAGAGGCATGTTCGACAGCAAGATATTCTTTGCTGTCATTTTCTCGACAGTGGCATTTCAAGCAATCATAGTCGAGTTCCTGGGAACCTTTGCGAGCACGGTACCTCTGAACTGGCAGCACTGGTTGCTCAGTGTATTAATTGGAGCAGTCAGCATGCCCATATCTGCTATTCTCAAGTGCATTCCAGTTGAAAGAGACACAACAACAAAGAACCATGATGGTTATGAAGCACTTCCATCTGGTCCGGAGCTTGCTTAA 2625 0.4175 MFVWEALHDLTLIILIVCALVSIAIGLPTEGWPKGVYDGLGIILSVFLVVTVTAISDYQQSLQFRDLDKEKKKLFVQVTRDGKRQKVSIYDLVVGDIVHLSTGDQVPADGVFVTGYSLLIDESSLSGESEPVNIDEQKPFLLAGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEEETPLQVKLHGVATIIGKIGLAFAVLTFIVLTIRFLVEKAVSGDFSSWSMNDAMKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVNKIWVCEKEAEIKGNESAEKLKTEIPEEVMNILLQAIFQNTSSEVVKDETGNNTILGTPTESALLEFGLLTGGDFDAQRSTYKIIKVEPFNSVRKKMSVLVSLPNGGVRAFCKGASEIILRMCDKIIDSNGNAADLPEEQAKKVNDVINNFASEALRTLCLAVKDIDATEGESSIPDHGYTLIAIVGIKDPVRPGVREAVQTCLAAGITVRMVTGDNINTARAIAKECAILTEGGVAVEGPEFRNLSPEQMRDIIPNIQVMARSLPLDKHTLVSNLRNMFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVAKWGRAIYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMERPPVGRKASFITKPMWRNIFGQSLYQLIVLALLTFDGKRLLGLTGSDATQVLNTLIFNSFVFCQVFNEINSREIEKINIFRGMFDSKIFFAVIFSTVAFQAIIVEFLGTFASTVPLNWQHWLLSVLIGAVSMPISAILKCIPVERDTTTKNHDGYEALPSGPELA 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01251 874 ProSitePatterns E1-E2 ATPases phosphorylation site. 292 298 IPR018303 -
Adu03g01251 874 SFLD p-type atpase 272 644 IPR044492 -
Adu03g01251 874 Gene3D - 608 857 - -
Adu03g01251 874 SUPERFAMILY Calcium ATPase, transduction domain A 75 171 IPR008250 -
Adu03g01251 874 Pfam E1-E2 ATPase 76 268 - -
Adu03g01251 874 PRINTS P-type cation-transporting ATPase superfamily signature 290 304 - -
Adu03g01251 874 PRINTS P-type cation-transporting ATPase superfamily signature 121 135 - -
Adu03g01251 874 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
Adu03g01251 874 PRINTS P-type cation-transporting ATPase superfamily signature 488 499 - -
Adu03g01251 874 PRINTS P-type cation-transporting ATPase superfamily signature 510 520 - -
Adu03g01251 874 PRINTS P-type cation-transporting ATPase superfamily signature 615 627 - -
Adu03g01251 874 CDD P-type_ATPase_Ca_PMCA-like 2 724 - -
Adu03g01251 874 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 852 IPR023298 -
Adu03g01251 874 PRINTS H+-transporting ATPase (proton pump) signature 591 607 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu03g01251 874 PRINTS H+-transporting ATPase (proton pump) signature 448 466 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu03g01251 874 PRINTS H+-transporting ATPase (proton pump) signature 623 648 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu03g01251 874 PANTHER CALCIUM-TRANSPORTING ATPASE 1 858 - -
Adu03g01251 874 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 2 853 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Adu03g01251 874 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 296 500 IPR023299 GO:0000166
Adu03g01251 874 Gene3D - 493 607 IPR023214 -
Adu03g01251 874 SFLD C1.7: P-type atpase like 272 644 - -
Adu03g01251 874 PANTHER CATION TRANSPORTING ATPASE 1 858 - -
Adu03g01251 874 Pfam Cation transporting ATPase, C-terminus 676 849 IPR006068 -
Adu03g01251 874 Pfam Cation transport ATPase (P-type) 346 430 - -
Adu03g01251 874 Gene3D - 151 302 - -
Adu03g01251 874 SUPERFAMILY HAD-like 289 696 IPR036412 -
Adu03g01251 874 Gene3D - 52 150 - -
Adu03g01251 874 Gene3D - 303 492 IPR023299 GO:0000166
Adu03g01251 874 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 558 679 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu03g01251 874 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 42 314 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01251 Adu-Chr3 16562019 16567427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01251 1 871 Primary Pumps ATPases AT2G41560 75.229 0.0 1366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01251 K01537 - gmx:100785768 1499.57