Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01235 ATGAACGTCCCTCTTCTCTCTTCAGTCTTTCTCCTTCTCCTCACCGTCACCCTCTTCTCTCCACCTCTTTCTCCTCTGGCACTCACTGACGTGTCCGAGCTACGCCGGTCCGACTCTCCGGTCTCGCTCGCTCACTCACTGTGTCACCGTCGCCCTCCCTGCCATCGTCTTTGCCGGCGTCAAAGGGAACCAGTCAACCAGCGTCTGAGGTCGTGGTCGTCTTCTACTCTTCTTGTTGCCGTCGTCAGTTGGTTAAACACCATTACACGACGTACCTCTTGGGGTACTGCGCTCGTTAAGATCTCTCCTTACACCTTCTCCGCCGTCGGCATCGCCGTCTCCATCGGTGTCTCTGTTCTCGGTGCTGCTTGGGGGATTTACATAACTGGTAGCAGCTTGATCGGTGCTGCAATCAAGGCTCCCCGAATCACTTCCAAGAATCTCATTAGTGTAATCTTCTGTGAAGCTGTTGCTATATATGGTGTTATTGTGGCTATTATTCTACAAACAAAATTAGAAAGCGTTCCTTCATCACAGATCTATGCAGCCGAGTCTCTTAGGGCTGGATATGCAATCTTTGCTTCTGGACTTATTGTTGGCTTTGCAAATCTTGTTTGTGGattgtgtgtaggGATCATTGGAAGCAGCTGTGCATTGTCTGATGCTCAAAACTCCTCTCTCTTTGTGAAGATTCTTGTGATTGAAATTTTTGGTAGTGCTCTTGGGCTATTTGGAGTTATTGTTGGAATCATTATGTCAGCTCAAGCAACATGGCCAACAAAAGTTTAA 789 0.4753 MNVPLLSSVFLLLLTVTLFSPPLSPLALTDVSELRRSDSPVSLAHSLCHRRPPCHRLCRRQREPVNQRLRSWSSSTLLVAVVSWLNTITRRTSWGTALVKISPYTFSAVGIAVSIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSQIYAAESLRAGYAIFASGLIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTKV 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01235 262 CDD ATP-synt_Vo_c_ATP6F_rpt1 106 168 - -
Adu03g01235 262 SUPERFAMILY F1F0 ATP synthase subunit C 103 171 IPR035921 -
Adu03g01235 262 SUPERFAMILY F1F0 ATP synthase subunit C 186 253 IPR035921 -
Adu03g01235 262 PRINTS Vacuolar ATP synthase 16kDa subunit signature 122 146 IPR000245 GO:0033179|GO:0046961|GO:1902600
Adu03g01235 262 PRINTS Vacuolar ATP synthase 16kDa subunit signature 204 230 IPR000245 GO:0033179|GO:0046961|GO:1902600
Adu03g01235 262 PRINTS Vacuolar ATP synthase 16kDa subunit signature 231 254 IPR000245 GO:0033179|GO:0046961|GO:1902600
Adu03g01235 262 PRINTS Vacuolar ATP synthase 16kDa subunit signature 148 172 IPR000245 GO:0033179|GO:0046961|GO:1902600
Adu03g01235 262 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 89 260 - -
Adu03g01235 262 Pfam ATP synthase subunit C 193 252 IPR002379 GO:0015078|GO:0033177|GO:1902600
Adu03g01235 262 Pfam ATP synthase subunit C 110 168 IPR002379 GO:0015078|GO:0033177|GO:1902600
Adu03g01235 262 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 89 260 - -
Adu03g01235 262 Gene3D - 104 259 IPR035921 -
Adu03g01235 262 CDD ATP-synt_Vo_c_ATP6F_rpt2 188 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01235 Adu-Chr3 15500911 15505250 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01235 31 261 Primary Pumps ATPases(2) AT2G25610 73.593 3.35e-111 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01235 K03661 - han:110898508 307.76