Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01226 ATGGCAAAGGGTGATGATGCTGTGAGAAGGAAGAAGAACAAAGCCATATGCAAAAAGCTCAGAAGAAAGAATGACTCTTCCACTGTCTCTGCCAAGGCAGCTGCTGCTATTGCCGCCAAGAAGCGCCGCAAGGCCGGTAAACGCCGCATGTGCCAGGGAATGTGCTTTAGTCTGCCTTCTCCTGATGATCCATTTAATGATCATCATGGGAAAGAGATATTTAAAAGAAAAGCTCCTGGAAAGAAAAAATCCACCACAAAAGAAAAGGTTCCCCGTAGAGAGGAGAGTGCAGCTAAAAGGGAAAACACATTTGGTGGGAATATTTCTAAGAAATCAATTTGTTTGCAAGTTGAAAATCAGCCTGTCATTGAGGTGACCGACATGGCTGACCGTTGTGGTGGTGTGCAACAACGAAATTGTGAATTGTCAGAGTTGCCTTCTAAGTTTGTCTTTTTGTGTCTAAGTTCAATTGAAAATGCATTGCACCATGGTGATGCCTATTCTGATGGAGAGGATAAAATTTTGTCTGTTGACACATGGGGATTAGAGTTTCTAAAGTGTTATTCTACAGGGAAAGATCTGATAGAAACCAGTGGAACCTCTGCCACTACTGAGCAAGTTGCGTGGATTGTTTCTGGTGTCGCTGATACATTTGTGAGAAAAGAGAAGCAAGGCTTATCTCTTGGCAGTCCTTTCCTTTTATTCCTTGTACCTTCCCAAGAGAAAGCTTTACAGGTCAGAACAGTGTGCAAGCCTTTGAAATCACTAGGAATACATACAGTGAGTATTCATTCAGGTGCTACCTTAGATCATCAAATTCAAGGGTTGAGAAGTTGTGAACCTGAGTTTCTTGTTTCTACTCCAGAGAGATTAATGGAGCTTCTATCATTGAAGGCCATTGACATATCTGATGTCTCCATATTGGTTGTTGATGGGCTTAGTACTGTTTGTAGTGCTGGTTACGCTGATACTATTAAATCCATCAAGTCATTTATTTCCAGCGATCCTCGTGTTTTGGTTTTCAATGATTCCTTTAACCATACGTCTATCCCAATGGTTCGGCATCTTCTAAATGGGTCAATCTGTAGACTCTCGCTCAGTAATAAAATTACCAGCTTAAGTTCATGCATTATCCAGTCTGTCCGGGTGTGTACATCAGATGAAGAGAAGCTTCTTAAGAGCACTGAAGCCCTTGATCAATTTCGGAGCAGCTGTTCTCATAATTCAAACATGCTATATATCTTAAGGAAAGACATCAAGTGTAATAAGTTGGTCAAAACTCTCAAAGGAAGGGGTTGTTGCATTTCACTTGATTCTAATACTGCAAGCTCTAATGACAGAGTGGATTCAAACAGCAGATCAGGACCAGTGGTTTCTGCAATAGATTTGGAGCATCTCTCCACTGCAGAGATAGGGCGGTATGATGTTGTAGTCTTACCTAGTTTTGTCCCATCCATGGACACTTACATCCATATTTTGACAAAGATGGCGCGCGAAAGTGTCAATGGTGTTCTGCACAGTTTCTTAACAGCAGAAGACGGAGAACTAGCTGGGCAGCTCATCAGCATTCTTGAACAATGTGAGCAGGAAGTACCTGAAACCTTGCAAGATCTGCATCATAAATCCGAGATGAAAAAATGA 1641 0.4174 MAKGDDAVRRKKNKAICKKLRRKNDSSTVSAKAAAAIAAKKRRKAGKRRMCQGMCFSLPSPDDPFNDHHGKEIFKRKAPGKKKSTTKEKVPRREESAAKRENTFGGNISKKSICLQVENQPVIEVTDMADRCGGVQQRNCELSELPSKFVFLCLSSIENALHHGDAYSDGEDKILSVDTWGLEFLKCYSTGKDLIETSGTSATTEQVAWIVSGVADTFVRKEKQGLSLGSPFLLFLVPSQEKALQVRTVCKPLKSLGIHTVSIHSGATLDHQIQGLRSCEPEFLVSTPERLMELLSLKAIDISDVSILVVDGLSTVCSAGYADTIKSIKSFISSDPRVLVFNDSFNHTSIPMVRHLLNGSICRLSLSNKITSLSSCIIQSVRVCTSDEEKLLKSTEALDQFRSSCSHNSNMLYILRKDIKCNKLVKTLKGRGCCISLDSNTASSNDRVDSNSRSGPVVSAIDLEHLSTAEIGRYDVVVLPSFVPSMDTYIHILTKMARESVNGVLHSFLTAEDGELAGQLISILEQCEQEVPETLQDLHHKSEMKK 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01226 546 MobiDBLite consensus disorder prediction 84 100 - -
Adu03g01226 546 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 ISOFORM X1 1 540 - -
Adu03g01226 546 Gene3D - 369 543 IPR027417 -
Adu03g01226 546 Pfam DEAD/DEAH box helicase 225 332 IPR011545 GO:0003676|GO:0005524
Adu03g01226 546 Gene3D - 222 368 IPR027417 -
Adu03g01226 546 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 540 - -
Adu03g01226 546 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 227 357 IPR027417 -
Adu03g01226 546 MobiDBLite consensus disorder prediction 66 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01226 Adu-Chr3 15050304 15060724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01226 234 538 Eukaryotic Initiation Factors Gene Family AT1G72730 22.188 1.36e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01226 - - gmx:100809099 694.501