Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01221 ATGTCAGTAGAACCTTGCGATGACTCGTCAATTGTAGTGGTTGCTATTGATAAATCCAAAGATCCTGGTTTGAGAGACCTGCAAAGTAGAGTAGTCAGTCTTTCAAGTAGCTGGAATTCTCCAAAATTTGCAGCTGTTCAGGTTGCAAATCTTGTTTATAGTAGGATGGGTGGTGGACGTTCAACTAAGGAAAATTTAGGCTCACAGTGGAAGGAGTGCGCCCAAAAACTAAAGAGCTGCCTGAATTCTGTCATTCTTCCGATTGGAAGCTTAGCTGTTGGTCTTTGTGTTCACCGAGCATTGCTGTTTAAAGTGTTAGCTGACTTAATTGACTTACCATGCCGAATTGCTAAGGGATGCAAGTATTGTAGCAGGGATGTTGGCGCTTCATGCATAGTGCAATTTGATTCTGTCAGGGAGTATATGATTGATTTAGTTGAAAGGCCTGGGTCAATGTGCCAGCCTGACTCTTTGCTGAACTCTGCATCATCAATGGTGGTCTCTTCACCATTATGTCACCCAAAGTTCAAGACAGTTGAAGCAGCTGAATATACTAAGACATTAGCCCAATCATTTTTCTTGGACAGTCAAGGATTGCACCATATATTTGATACAACATCAGGTGGTAAAATTAATCTTAGTGACAGAATGGATGTAAAAGAAACTAGAACTTCTAGTGCACACTATGCCCATGGGAATGACCACCTAGTTGCATCGGGTCTTAGTGCAGATGACTACGTTTCCGTTACTGAAACAAACCCGTCTGTAGTTGATCTTGGTGTGGAGGACCTAGATATAACATGGAGTGAACTTGTTCTGAAGGAGAACATTGGGGCAGGGTCATTTGGAACTGTCATTCGTGCAGATTGGCGTGGTTCTGATGTTGCTGTGAAGATTCTTAAGGTGCAAGATTTTGATTCTGAGCGAATAGAAGAGTTTCTGAAGGAGGTCTCCCTAATGAAGCGCATGCGGCACCCAAACATTGTACTTCTGATGGGTGCAGTATTTCAACCCCCAAGGTTATCTATAGTAACAGAATATTTATCAAGAGGCAGCTTGTATGAACTTCTGCGGATGCCTGGTGTTGGAATATCACTCAGTGAGATGCGTCGTTTAAGCATGGCTTATGATGTGGCAAGTGGAATGAATTATCTCCATCAAATGAGACCTCCCATTGTTCATGGAGATTTGAAGTCCCCAAATCTTTTGGTTGACAATACATACACTGTCAAGGTAGCTGACTTTGGCCTTTCACGTACAAAGGCAAATACATTCCTTTCATCTAAAACCGCCGCTGGGACACCTGAATGGATGGCGCCAGAAGTCATCCTAGGTAAACCATCAAATGAAAAATGCGATGTATTCAGCTTTGGTGTAATATTGTGGGAACTAGTTACCCTGGAACAGCCATGGAGACAGTTAAATCCTTCACAGGTTGTTGCAGCTGTTGGTTTTATGGACCAAAGACTAGAGATTCCAAGCCATGTAAATCCTCTAGTGACTGCGTTGATTGAGCTCTGTTGGGATACTGATCCCACAAGACGCCCTTCTTTCTCCCATGTTATGAAACGTTTGCGGCAAATAACTGCCGATGCAAATGGTCTCTCACCGTATCTCACAGAGTCAGACTCACACACTCCTCAAACCTCACTCACCCTCACCGTCACACGTCGAGTCGTCGACCCCATCCACCGCCTCCTCTTTGACGTTGCTGTTGCCTCCTCTTCTTGGTCAATAATGTCAGCTTCATATCCTGAGGATGTTCAAAGCAGTGAGACAGGATTTACTAGTGCCACTCCGTCCACTTTTGAATTAGTCAGATCTTTGGGACAGTCGGAGTCGATGTCGCTGTCACAGCCGTAG 1863 0.4412 MSVEPCDDSSIVVVAIDKSKDPGLRDLQSRVVSLSSSWNSPKFAAVQVANLVYSRMGGGRSTKENLGSQWKECAQKLKSCLNSVILPIGSLAVGLCVHRALLFKVLADLIDLPCRIAKGCKYCSRDVGASCIVQFDSVREYMIDLVERPGSMCQPDSLLNSASSMVVSSPLCHPKFKTVEAAEYTKTLAQSFFLDSQGLHHIFDTTSGGKINLSDRMDVKETRTSSAHYAHGNDHLVASGLSADDYVSVTETNPSVVDLGVEDLDITWSELVLKENIGAGSFGTVIRADWRGSDVAVKILKVQDFDSERIEEFLKEVSLMKRMRHPNIVLLMGAVFQPPRLSIVTEYLSRGSLYELLRMPGVGISLSEMRRLSMAYDVASGMNYLHQMRPPIVHGDLKSPNLLVDNTYTVKVADFGLSRTKANTFLSSKTAAGTPEWMAPEVILGKPSNEKCDVFSFGVILWELVTLEQPWRQLNPSQVVAAVGFMDQRLEIPSHVNPLVTALIELCWDTDPTRRPSFSHVMKRLRQITADANGLSPYLTESDSHTPQTSLTLTVTRRVVDPIHRLLFDVAVASSSWSIMSASYPEDVQSSETGFTSATPSTFELVRSLGQSESMSLSQP 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01221 620 ProSiteProfiles Protein kinase domain profile. 271 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01221 620 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 221 - -
Adu03g01221 620 CDD STKc_MAP3K-like 277 525 - -
Adu03g01221 620 PRINTS Tyrosine kinase catalytic domain signature 386 404 IPR001245 GO:0004672|GO:0006468
Adu03g01221 620 PRINTS Tyrosine kinase catalytic domain signature 345 358 IPR001245 GO:0004672|GO:0006468
Adu03g01221 620 PRINTS Tyrosine kinase catalytic domain signature 433 443 IPR001245 GO:0004672|GO:0006468
Adu03g01221 620 PRINTS Tyrosine kinase catalytic domain signature 452 474 IPR001245 GO:0004672|GO:0006468
Adu03g01221 620 PRINTS Tyrosine kinase catalytic domain signature 496 518 IPR001245 GO:0004672|GO:0006468
Adu03g01221 620 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 221 - -
Adu03g01221 620 Gene3D Phosphorylase Kinase; domain 1 264 349 - -
Adu03g01221 620 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 247 533 - -
Adu03g01221 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 392 404 IPR008271 GO:0004672|GO:0006468
Adu03g01221 620 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 247 533 - -
Adu03g01221 620 ProSitePatterns Protein kinases ATP-binding region signature. 277 298 IPR017441 GO:0005524
Adu03g01221 620 Gene3D Transferase(Phosphotransferase) domain 1 350 535 - -
Adu03g01221 620 Pfam Ethylene-responsive protein kinase Le-CTR1 5 152 - -
Adu03g01221 620 SMART serkin_6 271 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01221 620 SUPERFAMILY Protein kinase-like (PK-like) 250 525 IPR011009 -
Adu03g01221 620 Pfam Protein tyrosine and serine/threonine kinase 272 525 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01221 Adu-Chr3 14826616 14839917 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01221 8 532 MAP Kinase Kinase Kinase AT5G03730 54.973 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Adu03g01221 PK_Tyr_Ser-Thr 2.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01221 K14510 - gmx:100807496 812.372