Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01218 ATGGGAAAGCATATTGGGGAGAAAGAATCTGAATTGTCAAGTGCAAGTTCTAGTCATCAAGAAAACCATCCAGGAAGAGTTTGGGGAATTTTTCATGTGATGAAGTATCATCATTGGCGCCATGTGAAAAGAAAGCATTCACACAAAAAGCATGATGATGGAAAACATGAAGCTAGTATGTACACCTTCAAACATTCTATCAAATCTCGGTTAAAAGCGCTCGTTCAAGAAGAAATATACAGAAAGAAGGGTCAACACAAGCGAAGCTCAACATGTCCATCGAAGTCACAACTAACTCGTGCCGATTCAATGCATCACATGGACGTTGATCCACTCAATGAGGAGTTGCTGACATCTAAGAACCCTAAGGCTAATGGTGATGTAACATGCAATGAAAAATGTTTAGACTGTGGTACTGTGTTTTCTGCTGACACTTTGGAAATGAGTAAGATTCATAAGCATAAGAGACATGACATAGATTCCAGTTCTCCTAATCAAGGTGTTCGAAACGAAAAGCTTAAGTCAATGAATGCAAAGATTCTTACAGCTGATGCTTCACCCCATCTTTTCAAGGATTTTCTTGATGCTTTGGATTTGATGAGCAAAAACAAGGATTCTGTGTTGAAATATATACAGGAACCTGAAGGTTCTCCTTCAATTCCGTCTCCGGTTCATAATAAACAAGATCTCAGAAGCAAATCGAAACGATCAAACTCTGTTTCGTTTCCTCTGCCGGATTCTTCATCAGGAAGTAAGGATTCTAATAAGCCTAGACAGCACAAAATAGAAAATTCTCCACAACGTTCACCGGAGGTTGCTAGCAATGTGAGAATTAAAAGAAATTTCTTGGATCTCAAAAAGAAGATAATGCAAATAATTGAAGAGCGCAAGAAAGAGAAGCATCGCATTGCAATGGATGCTATAGTGGACAAAATCCCTCAAGGAAACAAACCTTCAAAAATTTCAAAAAAGTACACACATGATCCATTGAAAGACCCCGCAATTGATATAGAAGGGAAAGAATCTATGACAAAGAGTTATAGCAATCGTCTCTCTTCTTTTTCCTTTAACAAACGTCCTCAATCTACCATGAGAACTGAATCTCTAAAAGAATCAGCTGGCAGATATTCTCAGCTGTATGAGACTTGTTTCAATGCTGAAGCCAATTGTCCTAAGGCGGCTGACACAATAAAGTTGAAGGCAGAAGAGAAGAGTTCGGTGTTAACGACCCCAAAAACCTTTCAAAGGTTCCATTCATTACCTAACATTACACCCTACCTCAACCAAAGTGATGATTCTTCTCTGTTTCTCTCTGCCCAAAATTCTTTTAGGCAGCGTGATGGCGAAAGCATTTTAAGAAGTTTGAACAATGTTTGTGATTCAGACGGTGAAGTTTTGCTACGAGCTCTAGATGACGATGCAATTCAAGAAAGCATCTTGAATGCTCTTGAACCGAAGAAAACTCTTGTAAGGAGTGAATCAATATCAGAACAAGATGTTGATGCTTCAGGAAACTTGAGTGATAGTGATGGTGCTTCTTGCTCTGAACTAGTTACTGGACATGGAGTAGAATTTCCTCATATGCTTGGAGAAGCAAACTCGGTCTTCTCTTGTGACACCAACTTCATGGAAGACACATTTGATCTTGATAAGTTAAACATATTGGACGGTGAGCTATTTTATGACACCGAATCAGATCAGCAAGAAGTAGTTGGGAGAGGAGATTACACTCAAAAGTTCCAAACTATAAGTAAGCGCTTCAATTACAAAATTCCATGTGTTGAAGTTGATCCAAGCCATGAAGGTGCATTCAATTACGTGAGAAAGGTGTTGGAGCTCTCTGGTTTCACTGGCTCTGAATCTCTTGAAATGTGGTATTCAGAGAATCAGCCAGTAAATCCTTCAGTTTATGAAGAATTAGAAGGCTGCTTGCTTCTTGATCCTGATTGTTCTGGTAATATTGATAAGGGTGGACAATGTAACCATTTACTTTTGTTTGATATAGTCAATGAGGGGTTGTTGGAGATTTTTGGAAGATCATATTGCTATTACCCTAGATCATTATCTTCACTCTCCCATGTTCATCCATTGCCAGTAGGAGAAAATGTTCTAAGAAAAGTATGGGCACTTATTAGCTGGAACCTTAGATCAACATCTGAGCCTTACCCATCATTGGATTACTATGTGAGTAGAGATCTTGCAAAAGATGATGGGTGGATGAATCTCCAATTTGATTCTGAATGTGTGGCCCTTGAGCTTGATGACTTGATTTTTGATGATCTACTAGAGGAAATTATACGCACTTAG 2307 0.3884 MGKHIGEKESELSSASSSHQENHPGRVWGIFHVMKYHHWRHVKRKHSHKKHDDGKHEASMYTFKHSIKSRLKALVQEEIYRKKGQHKRSSTCPSKSQLTRADSMHHMDVDPLNEELLTSKNPKANGDVTCNEKCLDCGTVFSADTLEMSKIHKHKRHDIDSSSPNQGVRNEKLKSMNAKILTADASPHLFKDFLDALDLMSKNKDSVLKYIQEPEGSPSIPSPVHNKQDLRSKSKRSNSVSFPLPDSSSGSKDSNKPRQHKIENSPQRSPEVASNVRIKRNFLDLKKKIMQIIEERKKEKHRIAMDAIVDKIPQGNKPSKISKKYTHDPLKDPAIDIEGKESMTKSYSNRLSSFSFNKRPQSTMRTESLKESAGRYSQLYETCFNAEANCPKAADTIKLKAEEKSSVLTTPKTFQRFHSLPNITPYLNQSDDSSLFLSAQNSFRQRDGESILRSLNNVCDSDGEVLLRALDDDAIQESILNALEPKKTLVRSESISEQDVDASGNLSDSDGASCSELVTGHGVEFPHMLGEANSVFSCDTNFMEDTFDLDKLNILDGELFYDTESDQQEVVGRGDYTQKFQTISKRFNYKIPCVEVDPSHEGAFNYVRKVLELSGFTGSESLEMWYSENQPVNPSVYEELEGCLLLDPDCSGNIDKGGQCNHLLLFDIVNEGLLEIFGRSYCYYPRSLSSLSHVHPLPVGENVLRKVWALISWNLRSTSEPYPSLDYYVSRDLAKDDGWMNLQFDSECVALELDDLIFDDLLEEIIRT 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01218 768 Pfam Domain of unknown function (DUF4378) 604 764 IPR025486 -
Adu03g01218 768 MobiDBLite consensus disorder prediction 235 252 - -
Adu03g01218 768 PANTHER TRM32-LIKE PROTEIN (DUF3741) 277 767 - -
Adu03g01218 768 PANTHER TRM32-LIKE PROTEIN (DUF3741) 1 59 - -
Adu03g01218 768 PANTHER TRM32-LIKE PROTEIN (DUF3741) 61 263 - -
Adu03g01218 768 PANTHER PROTEIN TRM32 277 767 IPR044257 -
Adu03g01218 768 PANTHER PROTEIN TRM32 1 59 IPR044257 -
Adu03g01218 768 PANTHER PROTEIN TRM32 61 263 IPR044257 -
Adu03g01218 768 Pfam Protein of unknown function (DUF3741) 174 214 IPR022212 -
Adu03g01218 768 MobiDBLite consensus disorder prediction 213 275 - -
Adu03g01218 768 MobiDBLite consensus disorder prediction 82 102 - -
Adu03g01218 768 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01218 Adu-Chr3 14339880 14343884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01218 184 758 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 32.855 5.97e-72 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01218 - - adu:107477783 1462.97