Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01215 ATGTCAAAAGGGTATTCTGTGATTGTACTCTTACTATTATTTTTATCTCTGATTCTTTGCACGGCCGAAGGGTTGAACGCAGAGGGGCAAATCCTCCTAGACCTCAAGAATGGTTTCCATGATAAGAATAATCTTTTGCGGAATTGGAACCCTGCTGATGAAACTCCATGTGAATGGTTAGGCGTAAATTGCTCTTATTATGAATATAATAATAGTAAAAGTCCAGTTGTCATGTCCCTTGATTTGAGTTCAATGGGTCTTTCTGGAATTTTAAATGGTAGTAGCATTGGAGGTTTGACTCACCTAACTTATCTCAATCTTTCTCACAATAAGTTGAGTGGAAAAATACCAAAGGAAATTGGCGATTGCTTGAATTTGGAGTATCTTTACTTGAACAATAACCAATTTCAGGGACCAATTCCTGATGAACTGGGGAATTTGTCTCGTTTGAGAAGCTTGAACATATGCAACAACAAACTCAATGGTGTTTTTTCAGATGAGTTTGGGAACTTGTCTTCATTGGTTGAATTGGTAGCCTATAGCAATTTTCTTGTTGGTCCCTTGCCTAGTACCATTGGGAAGCTCAAGAATCTTGTGACTTTCAGAGCCGGGGCAAATAACATTACCGGTTCACTGCCAAAGGAAATAAGTGGGTGCGCAAGCTTGATGTATCTCGGTCTTGCGCAAAATGATATATCAGGGGAGCTTCCAAGTGAGATTGGGATGCTTCAGAATTTAACAGAATTGATTCTATGGGACAATCAGTTATCAGGGCCTATTCCCAAAGAGATTGGGAATTTAACCAATCTTGAGATTCTTGCTTTGTATTGGAATGATCTTGTTGGACCTATACCTCCAGAGATTGGGAACCTCAAGTCATTGAAGTTTTTGTATCTATACAAAAACAATCTGAATGGAACCATTCCAAGGGAAATTGGGAACCTTTCTTCTGCTAGGGAAATTGATTTCTCAGAGAACTCTCTAGTAGGGTACATCCCATCCGAGCTGAGCAAAATCCGTGACCTGCGCTTGCTCTTTCTTTTCGAGAACCATTTAATTGGTGTCATACCGGATGAGCTCAGTAGCTTGAGGAATCTGTCAAGGCTCGACCTGTCCATGAATGGCCTTACTGGCTCGATTCCTTCAGGATTTCAATACTTGACTAATATGTCCCAGTTGCAGCTCTTTGACAACAAGTTGAGTGGTGTTATCCCTCAAGAACTTGGACTTCATAGTCCTCTTTGGGTGGTTGATTTCTCTGATAACAATTTGACAGGAACAATACCTCCTCATCTATGCTGGAATTCTCATTTGATGTTGTTGAACCTTCAATCCAACCGGTTTTATGGAAACATACCAAGAGGGATACTCAAGTGCAAGTCATTAGCGCAGATGCTTGTAGTTGGAAACATGCTTACAGGTGGCTTCCCTTCAGAACTCTGCAAACTGCCAAACTTCATCGCCATCGAGTTGAACGAAAACAAGTTCAGTGGTCCGATTCCTCCTGTGATCGCGAACTGCAGTAAATTACAAAGACTACACATAGCAAACAATTACTTCACACTGGAGTTACCTAAGGAAATTGGAAATCTTTCTCAGCTGGTGACCTTCAATGTTTCATCAAACCACTTCACTGGAACAATCCCATCCGAAATCTTTAGGTGCCAGAAGCTGCAAAGGCTGGATCTCAGTAACAACAAGTTTATTGGTTCCTTGCCGAACAACATAGGAACACTTGAACATTTGGAGATTCTCAAACTCTCTGGCAATGAACTCTCTGGAAAAATCCCTGAAGAAATAGGTAATCTATCTCATTTGAACTGGCTGCAAATGGATGGCAATTTGTTTTCCGGCGAAATTCCGGCTCAGCTTGGTCGCCTCTCGACCTTGCAGATTGGAATGGATCTCAGTTACAATAATCTTTCTGGGAGAATACCATCTCAGCTCGGTAATCTCAATATGCTTGAGTATATCTATCTCAATAACAATCATTTGGATGGCGAAATTCCAAGCTCATTCGACCAGCTTTCGAGCTTGCTGGGATGCAATTTCTCATACAACAACCTCTCTGGACCAATACCTTCAGATAAGATCTTCCAAAATATGGCTGCAAGCAGTTTTCTTGGTGGTAACAACGACCTCTGCGGTAGACCTCTCAATGAATGCAACTCCGATCTGTCTTCTCGTGGTTTTCCTCCGGTTAGACATGACTATTCTCGCCGTGCTAAAATAGTCATGATCGCTGCAGCCACCGTGGGCAGCGTTTCTCTCATCTTAATTTTAGTTATTTTATATGTTATGAGATGGCCGTTCAATTCCGCGAGTTCCTTGAGAGACACGGAATCTCCCTGCCTTGATTCGGATGTCTATTTTCCTCCGAAGGACGGCTTCACATTCCAGGATCTTGTTGAGGCAACGAAAAGGTTTCATGAGAGCTATGTGATTGGCAGGGGAGCCTGTGGGACGGTTTACAAAGCGGTGATGAAGTCCGGGAAGACGATTGCAGTTAAGAAGTTAGCATCAAACAGGGAAGGGAACAACATTGAGAATAGTTTTAGAGCTGAGATACTGACACTAGGGAAGATTCGGCATAGAaacattgtgaagctttatggattctgctatcaccaaggctccaatctgctgctttatgagtacatggagaggggaagcttaggtgaagtgttgcatggttctgctaccaatttggagtggccaattcggttcatgattgctcttggtgctgctgagggtcttgcctacttgcaccatgattgcaagccaaagattattcaccgggatataaaatctaataacattcttcttgatgaaaattttgaggctcatgttggtgactttgggttagccaaagtGATTGACATGCCACAATCAAAATCCATGTCTGCAGTTGCTGGATCTTATGGCTATATTGCTCCTGAATATGCATACACCATGAAGGTAACAGAAAAGTGTGACATTTATAGCTATGGCGTTGTGCTCTTGGAACTGCTAACAGGTAGAGCACCTGTTCAACCATTGGAGCAAGGTGGTGATCTTGTGACATGGGTTAGAACCCATATTCGGAGCCACAACAACGTGTTGACGCAGGGAATACTCGACAATCGCATTGATCTTGAAGAACAAATCACTGTGAATCACATGCTGACTGTTCTGAAGATTGCTCTGCTTTGCACAAGCATGTCTCCTTCAGAGAGGCCTTCGATGCGCGAAGTCGTGTTGATGCTTATCGAGTCGAATGAACGCGAAGGAAACTTAACGCTCACTCGGACTAACCATGATCTTCCTTCCAAAGATGCCACACATTAG 3327 0.3901 MSKGYSVIVLLLLFLSLILCTAEGLNAEGQILLDLKNGFHDKNNLLRNWNPADETPCEWLGVNCSYYEYNNSKSPVVMSLDLSSMGLSGILNGSSIGGLTHLTYLNLSHNKLSGKIPKEIGDCLNLEYLYLNNNQFQGPIPDELGNLSRLRSLNICNNKLNGVFSDEFGNLSSLVELVAYSNFLVGPLPSTIGKLKNLVTFRAGANNITGSLPKEISGCASLMYLGLAQNDISGELPSEIGMLQNLTELILWDNQLSGPIPKEIGNLTNLEILALYWNDLVGPIPPEIGNLKSLKFLYLYKNNLNGTIPREIGNLSSAREIDFSENSLVGYIPSELSKIRDLRLLFLFENHLIGVIPDELSSLRNLSRLDLSMNGLTGSIPSGFQYLTNMSQLQLFDNKLSGVIPQELGLHSPLWVVDFSDNNLTGTIPPHLCWNSHLMLLNLQSNRFYGNIPRGILKCKSLAQMLVVGNMLTGGFPSELCKLPNFIAIELNENKFSGPIPPVIANCSKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNHFTGTIPSEIFRCQKLQRLDLSNNKFIGSLPNNIGTLEHLEILKLSGNELSGKIPEEIGNLSHLNWLQMDGNLFSGEIPAQLGRLSTLQIGMDLSYNNLSGRIPSQLGNLNMLEYIYLNNNHLDGEIPSSFDQLSSLLGCNFSYNNLSGPIPSDKIFQNMAASSFLGGNNDLCGRPLNECNSDLSSRGFPPVRHDYSRRAKIVMIAAATVGSVSLILILVILYVMRWPFNSASSLRDTESPCLDSDVYFPPKDGFTFQDLVEATKRFHESYVIGRGACGTVYKAVMKSGKTIAVKKLASNREGNNIENSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLLYEYMERGSLGEVLHGSATNLEWPIRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLEQGGDLVTWVRTHIRSHNNVLTQGILDNRIDLEEQITVNHMLTVLKIALLCTSMSPSERPSMREVVLMLIESNEREGNLTLTRTNHDLPSKDATH 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01215 1108 SMART LRR_typ_2 387 411 IPR003591 -
Adu03g01215 1108 SMART LRR_typ_2 652 675 IPR003591 -
Adu03g01215 1108 SMART LRR_typ_2 243 267 IPR003591 -
Adu03g01215 1108 SMART LRR_typ_2 99 123 IPR003591 -
Adu03g01215 1108 SMART LRR_typ_2 531 555 IPR003591 -
Adu03g01215 1108 SMART LRR_typ_2 363 386 IPR003591 -
Adu03g01215 1108 SMART LRR_typ_2 291 315 IPR003591 -
Adu03g01215 1108 SMART LRR_typ_2 147 170 IPR003591 -
Adu03g01215 1108 SMART LRR_typ_2 579 603 IPR003591 -
Adu03g01215 1108 ProSiteProfiles Protein kinase domain profile. 809 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01215 1108 Gene3D Phosphorylase Kinase; domain 1 775 886 - -
Adu03g01215 1108 Pfam Leucine rich repeat 77 136 IPR001611 GO:0005515
Adu03g01215 1108 Pfam Leucine rich repeat 557 615 IPR001611 GO:0005515
Adu03g01215 1108 SUPERFAMILY L domain-like 469 719 - -
Adu03g01215 1108 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 1093 - -
Adu03g01215 1108 Gene3D Ribonuclease Inhibitor 408 726 IPR032675 -
Adu03g01215 1108 SMART serkin_6 809 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01215 1108 ProSiteProfiles Leucine-rich repeat profile. 557 579 IPR001611 GO:0005515
Adu03g01215 1108 Gene3D Ribonuclease Inhibitor 283 389 IPR032675 -
Adu03g01215 1108 Pfam Protein kinase domain 810 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01215 1108 Gene3D Ribonuclease Inhibitor 24 181 IPR032675 -
Adu03g01215 1108 Gene3D Transferase(Phosphotransferase) domain 1 887 1101 - -
Adu03g01215 1108 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 8 1093 - -
Adu03g01215 1108 SUPERFAMILY Protein kinase-like (PK-like) 787 1082 IPR011009 -
Adu03g01215 1108 SUPERFAMILY L domain-like 73 456 - -
Adu03g01215 1108 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Adu03g01215 1108 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
Adu03g01215 1108 Pfam Leucine Rich Repeat 655 676 IPR001611 GO:0005515
Adu03g01215 1108 Gene3D Ribonuclease Inhibitor 182 282 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01215 Adu-Chr3 14121577 14127377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01215 25 1084 Receptor kinase-like Gene Family AT4G26540 38.091 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu03g01215 Pkinase 3.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01215 - - gmx:100805792 1668.67