Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01209 ATGGAGCATCTCGTTGATGACAAAAGTGATGGTATGGAGCATCTTGTTGATGATGACAAAGGTGATGGTGTGGAGCATGTTGTTCATGATAAAAGTGATACTATGGAGCATGCGGATGATGATGATAGTGATGATTCTAGTAGTGACAGCGGTGATGATGATTTACAAGAGGATCAAGGTAAAGGAAATGATGTAAGTCACATGGAAGAGGCTACCATGTTTAAGAATAAAGCCGAACTGAGTAAAGAGGAAGTTTTGAAAATGGTGTTCGATACTCATGAAAAGGCCTATGATTTTTATGTGAGTTATGCTAAGTGTGTTGGATTTAGTGTCCGGAAAGGAGATGTGGCTCGTGATGATGATGGCAAGTTGATAAGACGAAGATTTGTATGCAACAGGCAAGGCTTGAGAGACAAAAAACATTACATGAGAATTGATAGAAAAAGGGATCAGAAACCGGAGACTAGGACGAATTGTCATGCAATGTTGAGTATTTACCTTGACAACCACACTTCAACTTGGAGAGTGAGAACCTTTGAAAAAGGCCACAACCATGAGCTAGCACCTGCTGGATTTGATTACATCGTGCCAAATACTCGTCGGTTAACAACGGCAAAAAAGGCACAAAGTGATGGTATCCGCATACATGGATTCCTAACATTTCAAATAATGGGTTTTATGGTTGGTCAAGCTAGGGCTTTTGCTGGAGTTGAATTCTCAAAGGACTTGTACAGTTACATTGATAAACAAAGATGTCCTAAGATAGTTGATGGTGATGCACTTGCAGCTATTAGCTACTTGCAGGGTAAGGCAGATTCTGATCCAACTTTGTTTGCTAGGTACACCACTACAGATGATGATCAATTGGGAAATTTGTTTTGGGCTGATGGCTTAAGTCAAGTTGACTATGAGTACTTTGGGGATGTGGTTGGACTTGATACAAAATACAAAGAAAGCATGTACCACAGACGCTTAGTTATCTTTTCTGGTACTAATCATCATCGACAAACTTGTATTTTTGCATGTGCCTTACTAGGTGATGAGCGAGCTGACACATATAAATGGGCATTGGAGAATTTCTTAGATGCAATGGAAAAGAAGCACCCAAGTGCAGTGGTAACTGATGATAATGAGGCCATGAGAGAGGCAATTCAGGTGGTGTTCCCAAATGCTACCCATAGGTTATGTGCTTGGCATCTTCAAAAAGGTGCAGCGTACAACATTAGGGATACTGAATTTGTTGAGGCTTTCAAGAAATCTATTTATACCAACTTTGATCCTGATGAGTTTGAGGAGTATTGGCGTAACATGATACAAAAGTTTGAGGTATACGATAGTATGTGGGTAGAGGAGACATATAAGAAGAAGGAAATGTGGGCCACTACTTACCTTCGTGATAAGTTCTGTTCTGGACTAAGAGCATCATCACGATGTGAGGGTTTAAACCCATTGATGAAGAAATATATCAAGGCAAGGCACAATATACTCGAATTGGTACAACACTTTGAGCTTGCATTGAAGGAATTTAGGAACAATGAATTGGTAGCAGAGTTCAATTCCATGTACAATGAGCCTGTTTTGACAACTGCATTAGAATCAATTGAGCGCAAGGCTGCTAAAGTGTTTACGAGGGAAATTTTCAAAGAAGTGCAAAAAGAGTTAGAAGGGGCTGCTTTACTATTTGTTGTTGGATGTGAAAACCTTTCAACGACTGCCACGTTTAAATTGAAATTACCCGAAAAGATGATTCTTAAAAGATGGACTCAAGCTGCAAAGTCTTTTAATGAGCTTCCGGATGAAGAAGATGAGGTGAATGATAAAAAGTTCTTGTTTCGTTATGGTGCATTATGTGCTGCAAGTAATTGGATGTCATTTCTGGCAGCAAGAAAATTGCATAATTTTCTTGAAACAAAAGATGAAATTTATAAAATCACGGCTAAGCTAGAGCATAAAGGCTGTATGGTGGATACCAGATCATTTTCTATTCCCAAGAATACCATGGATGACACGACCAAGGGTGCATCACTAACTTATAAGAATGGTAAGAAGCGGAGGCGTTGCAAAGCTTGTAACAAGATGGGTCATTCAAAGTCTAGTTGTCCAAGGGTCAAGGACAGAAGGTCTCGAGGAGATGATCTCAGTTCGTCTTCAATGTCAGATAATCCTCGAAATGCGGGTCATGCCACAAATAGCGCAGTGGATCCTCCAAATACTGGTCCTGCAACACATAACACTCTGGATGATCCTCCAAATGCAGGTCCTGCAACAAATAACGAGGTAGGGCAGCCTCCAACAGACTCATCGACCGCCATGACACAATCGCTAGCTGTGAATCATGCAGCTGCAGCCTCTCGATTCGGGGTATGGGGACCCCAATTTCTTCTTCCTGGTCCTGGTCAACCTTGTTTTGCCGCAAATATAGGTCACCAATACTATCTTGCAAATCAAGCAATATGTCGGAGGTCCGAATCCTCAATTCCAAGGCTTAGCACAGCAAAAGCGTGGCAAAGGTCGTGCTCGTCGATGATCATATCTTTAGAAACATGGTTTGAAGTCTTGTTGAGAAATGTCACTAATCAAGGATGA 2586 0.4095 MEHLVDDKSDGMEHLVDDDKGDGVEHVVHDKSDTMEHADDDDSDDSSSDSGDDDLQEDQGKGNDVSHMEEATMFKNKAELSKEEVLKMVFDTHEKAYDFYVSYAKCVGFSVRKGDVARDDDGKLIRRRFVCNRQGLRDKKHYMRIDRKRDQKPETRTNCHAMLSIYLDNHTSTWRVRTFEKGHNHELAPAGFDYIVPNTRRLTTAKKAQSDGIRIHGFLTFQIMGFMVGQARAFAGVEFSKDLYSYIDKQRCPKIVDGDALAAISYLQGKADSDPTLFARYTTTDDDQLGNLFWADGLSQVDYEYFGDVVGLDTKYKESMYHRRLVIFSGTNHHRQTCIFACALLGDERADTYKWALENFLDAMEKKHPSAVVTDDNEAMREAIQVVFPNATHRLCAWHLQKGAAYNIRDTEFVEAFKKSIYTNFDPDEFEEYWRNMIQKFEVYDSMWVEETYKKKEMWATTYLRDKFCSGLRASSRCEGLNPLMKKYIKARHNILELVQHFELALKEFRNNELVAEFNSMYNEPVLTTALESIERKAAKVFTREIFKEVQKELEGAALLFVVGCENLSTTATFKLKLPEKMILKRWTQAAKSFNELPDEEDEVNDKKFLFRYGALCAASNWMSFLAARKLHNFLETKDEIYKITAKLEHKGCMVDTRSFSIPKNTMDDTTKGASLTYKNGKKRRRCKACNKMGHSKSSCPRVKDRRSRGDDLSSSSMSDNPRNAGHATNSAVDPPNTGPATHNTLDDPPNAGPATNNEVGQPPTDSSTAMTQSLAVNHAAAASRFGVWGPQFLLPGPGQPCFAANIGHQYYLANQAICRRSESSIPRLSTAKAWQRSCSSMIISLETWFEVLLRNVTNQG 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01209 861 MobiDBLite consensus disorder prediction 714 771 - -
Adu03g01209 861 PANTHER OS02G0262500 PROTEIN 83 576 - -
Adu03g01209 861 Pfam FAR1 DNA-binding domain 98 188 IPR004330 -
Adu03g01209 861 MobiDBLite consensus disorder prediction 1 36 - -
Adu03g01209 861 SUPERFAMILY Retrovirus zinc finger-like domains 669 707 IPR036875 GO:0003676|GO:0008270
Adu03g01209 861 MobiDBLite consensus disorder prediction 687 771 - -
Adu03g01209 861 MobiDBLite consensus disorder prediction 37 53 - -
Adu03g01209 861 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 83 576 IPR031052 GO:0006355
Adu03g01209 861 Pfam MULE transposase domain 309 402 IPR018289 -
Adu03g01209 861 MobiDBLite consensus disorder prediction 698 713 - -
Adu03g01209 861 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01209 Adu-Chr3 13906747 13909824 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu03g01209 MULE 2.3e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01209 - - adu:107477751 1600.1