Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01208 ATGGATGAGCAATACCAGGAGAACGATGACATTAACCAACAAGAAGAGCTAGTTTGTGACCAAGGTATGATGGATGAACAGAATGAATTCAAACAAGATATCAGAGATGAATTTACTGAGGGAGCGTATTTTTCTAAATCTGATCAGTCAGAAGATACTCTTGAAGCTGCTTATGCGGTTGACTCCGTGCAAGACATTACAACTTTGAATTTCAATAAAAATTGTGCAGAGGAAATTGGTAAATGTCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATCTGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGTAAGACTTTCAAGAATAGTATTGACGAGATTTACAAACAAAAGTTTGTATGTCATAGGAAAGGATTCAAGGAGGAGAAATATTACACGATGAAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTAGGTGTGAAGCTCGAATGGATGTTAAATTTGTACCAGAAACTGGAAGAAAAATTTCAAAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCTGGGATTAGCACTTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAAGCGGGTATGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCATCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGACATGTCATGATTCAAGAGAGCTGCTAGAGAGATTTGCTGCTGAGTTATACACTCATGAGATATTTCTATTGTTTCGGCCATTTCTCATTAGAGCTGGATCAATGCGGGTGCTAAACATAGAGAATAACGATGATTGCATAAAGTACATTGTGTGTAAGCATGGGAGGCCCGATTTTATGTGGACCATTGAATTTCGTCAAGAAGAAATGATCTTCATGTGTACCTATTTAAGAATTGAGTCATTTGGAATTCCTTGCAAACATATTGTGAAAATTTTGGTTGACAGAGACATTTGTGAGATTCCCCGGTCATTGGTATTGGATAGATGGACAAAAAAGGTGAAATCAACACTCAATGATGCAAGTGGGTTCACTAGGGATGCTGTTGTTATTATTCGTCAAAGTGCCTTGATGGAATTTTCTAAACAATTGGTTGTTGTTGCTGCTAAAGTCCCAGAGAGATATGAAGAGACACTTGACATAATTATGAGATTGTACTCATCTTACAAGGATACATACGAAGGCACTAATCAACCTCAGTCAGGTGTAGCTAAAAGTAGCAATCCGTATGTGCATCAAACCAATATAGGCTCAGGACAACCATCTAAGAAGAAGCGGCAACGTTGTAGTGTTTGTCAAATTAAAGGACATAAGAAGGCAACATGTCCGTGGCAAAAGGACATTGACAACAACGTTATAGAATATGAAGCTAATGGTCCGGATGATGGCGACATGTATACCGAACCAACGGCTGATTTAGATAGCGTGCGTGTGGAAGCACCATCGCGTGTGGAAGCTTTGTCGTCGTCTCTTCTGTTCGAGAACTCTCTCTTTGTGTTCACGTGTGAAGGTTCTGTTGCCGTTGCGTTAAAGCTCTGTTGCCATCGCGTGAAAGCTTTGTTCGAGCTCTCCCTCTCTCTGTCTTTGCCGTTGTCTGTCTCTCGCTGCCGGTTTATGAAGCCAATAACAAAAGGACACTACCCAAGTTCCATGCAGCTTCTGGTGGGAAATAGGTTGCCAAAGTTCTCTTCATATCAATCAGGGATTTTAAGAGGGTCTTTTGATTTTATTGGATTAAACTACTACACCTCCTCCTATTATGCTGCTGATGCACCAGAACTAAGTAAAGCCAAGCCTATCTATCTTACAGATTCTCTAGTTACTCTTACAAGTAAGAACATGTTTGTGTACTAA 1932 0.398 MDEQYQENDDINQQEELVCDQGMMDEQNEFKQDIRDEFTEGAYFSKSDQSEDTLEAAYAVDSVQDITTLNFNKNCAEEIGKCHFSTLQLAFDFYLKYSKSKGFSARKSKTFKNSIDEIYKQKFVCHRKGFKEEKYYTMKKRKKEPRLETRTRCEARMDVKFVPETGRKISKADIMQMMNMLKSGISTSQIFGLLASQASGYEFVGYGPRDMYNEIARQRHQIPGDAARVLKKLEDMRLKDPQLYFKTCHDSRELLERFAAELYTHEIFLLFRPFLIRAGSMRVLNIENNDDCIKYIVCKHGRPDFMWTIEFRQEEMIFMCTYLRIESFGIPCKHIVKILVDRDICEIPRSLVLDRWTKKVKSTLNDASGFTRDAVVIIRQSALMEFSKQLVVVAAKVPERYEETLDIIMRLYSSYKDTYEGTNQPQSGVAKSSNPYVHQTNIGSGQPSKKKRQRCSVCQIKGHKKATCPWQKDIDNNVIEYEANGPDDGDMYTEPTADLDSVRVEAPSRVEALSSSLLFENSLFVFTCEGSVAVALKLCCHRVKALFELSLSLSLPLSVSRCRFMKPITKGHYPSSMQLLVGNRLPKFSSYQSGILRGSFDFIGLNYYTSSYYAADAPELSKAKPIYLTDSLVTLTSKNMFVY 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01208 643 Gene3D Glycosidases 396 641 - -
Adu03g01208 643 ProSiteProfiles Zinc finger SWIM-type profile. 305 343 IPR007527 GO:0008270
Adu03g01208 643 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 257 428 IPR031052 GO:0006355
Adu03g01208 643 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 72 245 IPR031052 GO:0006355
Adu03g01208 643 Pfam FAR1 DNA-binding domain 92 162 IPR004330 -
Adu03g01208 643 SUPERFAMILY (Trans)glycosidases 560 628 IPR017853 -
Adu03g01208 643 Pfam Glycosyl hydrolase family 1 563 619 IPR001360 GO:0004553|GO:0005975
Adu03g01208 643 PANTHER OS03G0181600 PROTEIN 257 428 - -
Adu03g01208 643 PANTHER OS03G0181600 PROTEIN 72 245 - -
Adu03g01208 643 MobiDBLite consensus disorder prediction 421 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01208 Adu-Chr3 13836894 13840869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01208 564 637 Glycoside Hydrolase AT5G25980 54.054 6.85e-16 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu03g01208 Glyco_hydro_1 2.1e-07 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01208 - - aip:107607175 433.721