Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01191 ATGTTCCAACCAAACATGACTGAAGCTGTTGGTGGCCTTCACTATCATCACCAGTATCATCCTTTTGATATGGCTCAGAACACAACAACATCGGAGAGTGATGTACCGAGAATTCGAGAGGACGAGTTATTCGACAGCGCCACCAAGTCCGGCAGCGAGAACCTTGAGGTTGAAGGTGGTGGAGGAAGTGGTGGTGGTGGTGAAGGTGGTTCTGCTGGGGAAGACCAAAACCCTCGCCCTAATAAGAAGAAACGCTATCACCGCCATACCCAACACCAGATCCAAGAGATGGAAGCTTTCTTTAAGGAGTGCCCTCACCCAGATGACAAGCAAAGGAAGGAGCTGAGTAGGGAGTTAGGGTTAGAGCCATTGCAAGTGAAGTTCTGGTTCCAGAACAAACGCACTCAAGTGAAGACTCAAACTGAAAGGAGCGAGAACTCACAGCTAAGAGCGGAAAATGAGAAGCTTAGAGCAGATAACATGAGGTATAGGGAAGCACTAAGCAATGCATCGTGCCCTAGTTGTGGTGGCCCAACCGCCATAGGGGAAATGTCATTCGATGAACATCACCTCAGGCTTGAAAATGCACGTCTTAGGGAAGAGATTGATCGAATTTCAGCAATTGCAGCCAAGTACGTAGGCAAGCCTGTGGTGAACTATTCAAACCTCTCCCCTGCCCTCCCACCTCGCCCGCTAGAACTCGGCGTTAGCGGTGGCAGTGGCGGCTTTGGAGGTGGTAGTGACATGTACAGTGGTGGTGCCGGAGACTTCCTGAGGTCGATAAACGGGCCCTCGGAAGCCGACAAGCCACTGATAATTGAGCTGGCTGTTGCAGCCATGGAGGAGTTAGTTGGGATGGCACAAATGGGTGAGCCACTTTGGTTGACAATGACCTCCATTGACGGTGGCACTTCCACTGTGCTCAACGAGGATGAGTACGTTAGAACCTTCCCTCGTGGAATTGGCCCCAAACCTGCTGGGTTCAGATCCGAAGCTTCTAGAGAAACCGCTGTTGTTATCATGAACCATGTTAACCTCGTCGAAATTCTCATGGATGTGAACAATTGGTCGACAATGTTCTCTGGTATAGTCTCAAGAGCTATAACTATAGAAGTGCTATCAACAGGAGTGGCTGGGAACTACAATGGTGCTTTACAAGTGATGAGTGCAGAATTACAAGTACCTTCTCCACTTGTGCCAACTCGAGAGAGCTATTTTGTGAGATATTGTAAGCAGCATGTAGATGGGAGTTGGGCAGTGGTGGATGTGTCGTTGGATCATTTGCGCCCTGGTCTTACTCCAAGATCTAGAAGAAGGCCTTCTGGTTGCTTAATCCATGAAATGCCCAATGGTTATTCTAAGGTGACATGGGTTGAGCATGTGGAAGTGGATGATAGAGGTGTTCCTAACCTTTACAAGCAGCTTGTAAACTCTGGGCATGCATTTGGTGCAAAACGTTGGGTTGCAACTTTGGATAGACAATGTGAGAGGCTTGCTAGTGCCATGGCAACAAACGTTCCTACCGTAGATGTTGGAGTGATAACAAACCAAGAAGGGAGGAAGATTCCTCCCAAAACAGCCTTTGATTTCCTCCGTGATGAGAATTCAAGAAGTGAGTGGGATATTCTTTCAAATGGTGGAGCAGTGCAAGAAATGGCGCACATTGCAAATGGAAGAGATACCGGAAATTGTGTGTCGCTACTTAGAGTCAATAGTGCAAATTCAAGCCAGAGCAACATGTTGATACTGCAAGAGAGCTGCACAGATTCAACAGGCTCCTTTGTAGTTTATGCTCCTGTGGACATTGTTGCCATGAATGTGGTTTTGAATGGAGGGGACCCAGATTATGTGGCACTTCTTCCTTCAGGATTTGCCATCCTCCCCGATGGAAGTTCAGGCGGCTGCGGCAGCGGCATTGGTGGTGAAACAAATGGCCCTACTGGTGGGGGCGGTGGCGGCGGAGGTGGCTTCTTTGTCTGGTGA 1983 0.4876 MFQPNMTEAVGGLHYHHQYHPFDMAQNTTTSESDVPRIREDELFDSATKSGSENLEVEGGGGSGGGGEGGSAGEDQNPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQVKTQTERSENSQLRAENEKLRADNMRYREALSNASCPSCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYSNLSPALPPRPLELGVSGGSGGFGGGSDMYSGGAGDFLRSINGPSEADKPLIIELAVAAMEELVGMAQMGEPLWLTMTSIDGGTSTVLNEDEYVRTFPRGIGPKPAGFRSEASRETAVVIMNHVNLVEILMDVNNWSTMFSGIVSRAITIEVLSTGVAGNYNGALQVMSAELQVPSPLVPTRESYFVRYCKQHVDGSWAVVDVSLDHLRPGLTPRSRRRPSGCLIHEMPNGYSKVTWVEHVEVDDRGVPNLYKQLVNSGHAFGAKRWVATLDRQCERLASAMATNVPTVDVGVITNQEGRKIPPKTAFDFLRDENSRSEWDILSNGGAVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGSSGGCGSGIGGETNGPTGGGGGGGGGFFVW 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01191 660 ProSiteProfiles 'Homeobox' domain profile. 80 140 IPR001356 GO:0003677
Adu03g01191 660 Pfam Homeodomain 83 138 IPR001356 GO:0003677
Adu03g01191 660 SUPERFAMILY Homeodomain-like 70 140 IPR009057 -
Adu03g01191 660 SUPERFAMILY Bet v1-like 267 499 - -
Adu03g01191 660 CDD START_ArGLABRA2_like 269 496 - -
Adu03g01191 660 ProSiteProfiles START domain profile. 265 500 IPR002913 GO:0008289
Adu03g01191 660 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 522 643 IPR042160 -
Adu03g01191 660 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 25 521 IPR042160 -
Adu03g01191 660 SMART HOX_1 81 144 IPR001356 GO:0003677
Adu03g01191 660 ProSitePatterns 'Homeobox' domain signature. 115 138 IPR017970 GO:0000981|GO:0006355
Adu03g01191 660 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 522 643 - -
Adu03g01191 660 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 25 521 - -
Adu03g01191 660 Coils Coil 139 166 - -
Adu03g01191 660 Gene3D - 71 157 - -
Adu03g01191 660 SUPERFAMILY Bet v1-like 522 633 - -
Adu03g01191 660 MobiDBLite consensus disorder prediction 27 91 - -
Adu03g01191 660 Pfam START domain 275 497 IPR002913 GO:0008289
Adu03g01191 660 Gene3D - 327 497 IPR023393 -
Adu03g01191 660 SMART START_1 274 497 IPR002913 GO:0008289
Adu03g01191 660 CDD homeodomain 83 140 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01191 Adu-Chr3 13423140 13428974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01191 1 659 Homeobox Transcription Factor Family AT4G04890 61.507 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu03g01191 START 1.4e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01191 K09338 - thj:104800985 851.662