Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01164 ATGGAGTGGAGTAGAGGACACACTATAGGCCATGGATCCTCAGCTACCGTATCTATAGCCACCCGCCGTGAGGGCTGCCGTGTATTCGCCGCGAAGTCATCGGAGCTATGCAATTCAGAATCTTTACAAAGAGAACAGAGGATTTTATCTTCTCTATGCTCTCCTTATGTGGTTAATTTCAAAGGGAGTGACATAACCATGGAGAACAACAAGCTCTACTACAATCTCTTCATGGAGTACATGCCATTCGGAACCCTTTCCTCGGAAATTAACCGGCACGGCGGCCGGCTCGATGAGGCAAAAATTAAGACCTACACAAGGCAAATTGTGCAGGGGCTAGAGTATATACACTCTAAAGGGTTGGTACATTGTGACATAAAATGTTCCAACATCTTAATTGGCACCGAAGGCGCCAAAATTGGTGACTTGGGATGCGCCAAGAGTGTCGTGGATCCGCGAATCAGCGGCACTCCGATGTTGATGGCGCCGGAAGCGGTGCGGGGAGAGGATCAAGGGTGTGCTAGTGATATTTGGTCACTTGGGTGCACCATAATTGAAATGGCTAAAGGTGAAGCAGCGTGGCCTAATTTGTTGGACCCATTTTGTGTTCTTTATCACATTGCATATTCCGGTGAAGTTCCTGAGATTCCATGGTTTCTATCTGAAGAAGGTAAGGATTTCTTGGGGAAGTGTCTAAGGTGGAATCCAGAAGAGAGGTGTACCGCTACTCAACTTCTTAATCATCCTTTTCTCAATTCCAAGGTGGAATCAAATTCAACATCGCCAACAAGTATTCTTGAGCATGGGTTTTGGAGCTGTGTGGAAGAAGGTTCTCACACAACAAGAACAACAAGCCTTGGGGATTTGCCACCTGACAGGGTTAGAATGTTGGGTTTGTGTTCAGAGGAATCATGTTGGGCATCATGGAATGATGATGGGAACTGGATCACAATTAGAGGGAATGAGTGTGACTCATGGGGTGAAGGGGTTTTTCGTAATTTTGGGTCAGAGACAGCTTCTAGTAGTAATGGTGGTTTGGATCTGAAGGAGTTGGTGGAAAGCAATGTGAGTGTTGTTGATTCCTATGGTCTATGGACAATGAAGCATAGGGAACCAAGATTAAGTGATTTCCATCTCTTGGCAACAAAATCATACAATCAAAAACAGACTCAATCCAACCATAATTCACATTTTGAATCTTCTAGAGCTTCAATTCAAGAGAACTCTGATCTGGTCAACAAGTATTCCTGA 1251 0.4476 MEWSRGHTIGHGSSATVSIATRREGCRVFAAKSSELCNSESLQREQRILSSLCSPYVVNFKGSDITMENNKLYYNLFMEYMPFGTLSSEINRHGGRLDEAKIKTYTRQIVQGLEYIHSKGLVHCDIKCSNILIGTEGAKIGDLGCAKSVVDPRISGTPMLMAPEAVRGEDQGCASDIWSLGCTIIEMAKGEAAWPNLLDPFCVLYHIAYSGEVPEIPWFLSEEGKDFLGKCLRWNPEERCTATQLLNHPFLNSKVESNSTSPTSILEHGFWSCVEEGSHTTRTTSLGDLPPDRVRMLGLCSEESCWASWNDDGNWITIRGNECDSWGEGVFRNFGSETASSSNGGLDLKELVESNVSVVDSYGLWTMKHREPRLSDFHLLATKSYNQKQTQSNHNSHFESSRASIQENSDLVNKYS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01164 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Adu03g01164 416 Pfam Protein kinase domain 5 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01164 416 ProSiteProfiles Protein kinase domain profile. 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01164 416 SUPERFAMILY Protein kinase-like (PK-like) 3 270 IPR011009 -
Adu03g01164 416 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 15 1 336 - -
Adu03g01164 416 CDD STKc_MAPKKK 2 251 - -
Adu03g01164 416 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Adu03g01164 416 SMART serkin_6 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01164 416 MobiDBLite consensus disorder prediction 387 416 - -
Adu03g01164 416 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 336 - -
Adu03g01164 416 Gene3D Transferase(Phosphotransferase) domain 1 2 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01164 Adu-Chr3 12852961 12856401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01164 1 321 MAP Kinase Kinase Kinase AT1G05100 49.706 4.58e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Adu03g01164 Pkinase 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01164 K20716 - gmx:100819665 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01164 03 12852961 12856401 Adu04g00408 04 4791855 4793552 ECH
Adu03g01164 03 12852961 12856401 Adu03g01164 03 12852961 12856401 ECH
Adu08g01540 08 25630990 25632190 Adu03g01164 03 12852961 12856401 PCT