Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01160 ATGTTCACCTCAAGGAAGAAAATCCACAAGGATAATGATGCTGAACCCACTGAGTTTGAGGAGACAGTTGCACAGTACGTGTTTGATTTGGAGAACACTAATCAGGACCTGAAAAGTGATTTGAAAGATCTCTACATAAACCAGGCAATTCAAATGGACGTGGCTGGGAATCGCAAGGCTGTGGTCATCTATGTTCCTTTCAGATTGAGGAAGTCGTTCCGCAAAATTCATCTTCGTCTTGTCAGGGAGCTTGAGAAGAAGTTTAGTGGGAAGGATGTTGTGTTGATCGCCACAAGAAGGATCGTGCGTCCTCCAAAGAAAGGGTCTGCTGTTCAGCGGCCCCGTACCCGCACTTTGACTGCTGTGCATGATGCTATTCTTGAAGATGTAGTTTATCCTGCCGAGATTGTTGGCAAACGAGTCAGATACAGACTAGACGGATCAAAAATAATCAAAGTTTTCTTGGATCCGAAGGAACGCAACAACACTGAATACAAGCTGGAGGCTTTCTCTGGAGTTTACAGGAAGCTTACCGGAAAAGATGTATCTTTTGAGTTTCCAATCACAGAAGCCTAG 576 0.4444 MFTSRKKIHKDNDAEPTEFEETVAQYVFDLENTNQDLKSDLKDLYINQAIQMDVAGNRKAVVIYVPFRLRKSFRKIHLRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRTRTLTAVHDAILEDVVYPAEIVGKRVRYRLDGSKIIKVFLDPKERNNTEYKLEAFSGVYRKLTGKDVSFEFPITEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01160 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Adu03g01160 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Adu03g01160 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Adu03g01160 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01160 Adu-Chr3 12749210 12750246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01160 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 78.010 5.19e-113 318