Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01144 ATGGGAGGAGATGCTGGACTCTCCATGGATTCCTCCGATCCGATCCGGAGGTTCTTCCTTCGCAGTAATAGCCCTGTTATTCTCAACTCTTTTCCTGAACACAAGTGGAATATGAACCTCAACACGGATCATGAAACCGCCTCTTTTCAACAAGTCAACCTTATTAGTTCTTGTTCTTCGAGTCACGATCATCACCACAACACGAGACAAGAGTTAGACTTCTTCGTCACTCACAACGACGACAACCTTATCGCCTCTTCTTCTTTCCCTGCCGCCGACCACGATGACAATCATCGTCATTCCTTGGAATTCAAAGTGAACACTGGTCTGAATCTTCTCACTACCAGCACTACGGAGGACGATCACGTAAATTTGCAAGACAGAAGAACTAAACTTGAGGAGGTAGGTGTAATTGAAGCGGAGATAGAGCGAGTGAAGGAGGAGAATGAGAGGATAAGGGAGATGATTGATGAGGCAAACAGTCATTACAGTGCGCTTCAGATGCACCACATGAATCTGATGAACAAGAGCAGTGATGATGAAAGAGTATTGGTTCCAAGGCAGTTTATGGATCTTGGCTTAGCAACAAATTCGCACAATTGTTCATCATCAAGATCAAAATCACCATCAGGGAATAGTAGTGGTGATGGAGAGAAGAAGAGAATGAAAAGAGAAGAAAGCCCGACGAGGGAAGAAGAAGCTAACAAAAGTAGTCCAGCAAAACATAATCTTGACCAAGCTCACGAGGCCACTATGAGGAAAGCTAGAGTTTCTGTTAGAGCGAGATCAGAGGCACCTATGATAACTGATGGGTGTCAATGGCGGAAGTATGGACAGAAGATGGCTAAAGGAAACCCATGCCCTCGAGCTTATTATCGTTGCACCATGGCTTCCGGTTGTCCAGTTAGGAAACAGGTGCAAAGGTGTGCAGAGGACAGAACAGTGTTAGTGACAACATATGAAGGGAAGCACAACCACCCTTTGCCACCAGCAGCAATGGCTATGGCGCAAACAACTTCCTCAGCCGCAACAATGCTTCTTTCTGGTTCATCAATGTCAACCAATGACAACACCACCCTAATCAACAATGCAACAAACTTCTTAGCAACAACACTTCTTCCATCTTCTTCATCATCATCATCAGCTGCTACTTCAACCATGGCAACAATCTCAGCTTCAGCACCATTCCCAACTATCACATTGGACCTTACTCATGATGACTCCCCCAACAACAACAACATCAACAACAACAACCCTTTTCAGTTCCCAATAAGGCCTAGTACAATTCCACAAATACCCTTCCAGATATTTGGTGGTAATAGTAGTCATAATAATAGCAATAACCAATCAAAGTTTTGTGGTCTACAAATGCCTAATAATAATAATAAAGATCATAGTAATAGTAGTAGTAGTAGTAATAATCTTGTTGATACAGTTGGTGCTGCAATTGCATCTGATCCAAACTTCACTGCTGCTTTGGTATCAGCTCTTAGCTCCTTTATTAGTGCTGCTGCTCCTACTCAACAAAACAACATTAGCAATAGCAATGACAATGGCAATGGCACACTCAACAACAATAGCTAG 1584 0.4318 MGGDAGLSMDSSDPIRRFFLRSNSPVILNSFPEHKWNMNLNTDHETASFQQVNLISSCSSSHDHHHNTRQELDFFVTHNDDNLIASSSFPAADHDDNHRHSLEFKVNTGLNLLTTSTTEDDHVNLQDRRTKLEEVGVIEAEIERVKEENERIREMIDEANSHYSALQMHHMNLMNKSSDDERVLVPRQFMDLGLATNSHNCSSSRSKSPSGNSSGDGEKKRMKREESPTREEEANKSSPAKHNLDQAHEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMASGCPVRKQVQRCAEDRTVLVTTYEGKHNHPLPPAAMAMAQTTSSAATMLLSGSSMSTNDNTTLINNATNFLATTLLPSSSSSSSAATSTMATISASAPFPTITLDLTHDDSPNNNNINNNNPFQFPIRPSTIPQIPFQIFGGNSSHNNSNNQSKFCGLQMPNNNNKDHSNSSSSSNNLVDTVGAAIASDPNFTAALVSALSSFISAAAPTQQNNISNSNDNGNGTLNNNS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01144 527 MobiDBLite consensus disorder prediction 433 473 - -
Adu03g01144 527 Pfam WRKY DNA -binding domain 270 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu03g01144 527 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 47 521 IPR044810 GO:0003700
Adu03g01144 527 Gene3D WRKY domain 253 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu03g01144 527 SUPERFAMILY WRKY DNA-binding domain 261 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu03g01144 527 MobiDBLite consensus disorder prediction 214 260 - -
Adu03g01144 527 MobiDBLite consensus disorder prediction 402 473 - -
Adu03g01144 527 Coils Coil 135 162 - -
Adu03g01144 527 SMART WRKY_cls 268 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu03g01144 527 PANTHER OS05G0567200 PROTEIN 47 521 - -
Adu03g01144 527 MobiDBLite consensus disorder prediction 402 425 - -
Adu03g01144 527 MobiDBLite consensus disorder prediction 195 213 - -
Adu03g01144 527 ProSiteProfiles WRKY domain profile. 263 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu03g01144 527 MobiDBLite consensus disorder prediction 508 527 - -
Adu03g01144 527 MobiDBLite consensus disorder prediction 195 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01144 Adu-Chr3 12693170 12695511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01144 71 501 WRKY Transcription Factor Family AT1G62300 45.791 3.83e-107 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu03g01144 WRKY 5.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01144 - - ahf:112737496 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01144 03 12693170 12695511 Adu04g00410 04 4823085 4825100 ECH
Adu03g01144 03 12693170 12695511 Adu03g01144 03 12693170 12695511 ECH
Adu08g01539 08 25611502 25613162 Adu03g01144 03 12693170 12695511 PCT