Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01129 ATGGAAACCATGATGGCAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTTCCATACAGCAGTTTGCTAACCTTAGTGACGGTTAGATGTGGACATTGTGCCAATTTGCTAACAGTTAACATGGGAGCATCACTTCAACCATTAATACCACCTCATCAAGAATATCATCATCAGTCACAGAAACAGCACCTAAGCTTTGAAGAATCAAGCAGCTGCAAAGAACTGGGATCATCATCTTCAAAATGTAACAAAATTGCGCCATTTGAGCCTGTAGAGAGTCATCAATCACCTAGGATTCCTCCCATTCGTCCTCCGGAGAAGAGACAACGTGTTCCATCTGCTTATAACCGATTCATTAAGGAGGAAATTCAAAGGATCAAGGCCAGTAATCCAGATATTAGCCACAGGGAAGCTTTCAGCACAGCTGCTAAAAACTGGGCACATTTCCCTCATATTCACTTTGGATTAAAGATGGATGGCAATAATGACAAGCAAGCAAAGTTGGACCATAATAACGGTGAAGGAACTCAAAAGTCTAATAATGGATTCTACTGA 582 0.4158 METMMATERVCYVHCNFCNTILAVSVPYSSLLTLVTVRCGHCANLLTVNMGASLQPLIPPHQEYHHQSQKQHLSFEESSSCKELGSSSSKCNKIAPFEPVESHQSPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKMDGNNDKQAKLDHNNGEGTQKSNNGFY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01129 193 PANTHER PLANT-SPECIFIC TRANSCRIPTION FACTOR YABBY FAMILY PROTEIN 5 193 - -
Adu03g01129 193 Pfam YABBY protein 6 165 IPR006780 GO:0007275
Adu03g01129 193 PANTHER PROTEIN YABBY 6-RELATED 5 193 IPR006780 GO:0007275
Adu03g01129 193 Gene3D High mobility group box domain 103 160 IPR036910 -
Adu03g01129 193 MobiDBLite consensus disorder prediction 98 121 - -
Adu03g01129 193 MobiDBLite consensus disorder prediction 167 193 - -
Adu03g01129 193 SUPERFAMILY HMG-box 109 158 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01129 Adu-Chr3 12472665 12482181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01129 1 193 C2C2-YABBY Transcription Factor Family AT1G08465 63.077 1.45e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Adu03g01129 YABBY 2.1e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01129 K25796 - gmx:100500026 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01524 08 25392844 25400390 Adu03g01129 03 12472665 12482181 PCT