Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01120 ATGTTTGGGAGAGCGCCGAAGAAGAGCGATAACACCAGGTACTATGAGATCCTTGGAGTCTCCAAGAACGCTTCACAGGATGATCTCAAGAAGGCTTACAAGAAAGCCGCCATCAAGAATCACCCTGACAAAGGCGGTGATCCCGAGAAGGTAACGGATTTCTTGGATGTGTTTGGACTTCGGATTGAGCTGATTTATGACGTGCAAACTGAAAAGCGTGAGATTTATGATCAGTATGGTGAGGATGCTCTCAAAGAAGGAATGGGTGGCGGTGGTGGCGGCCACGACCCATTTGATATCTTCCAGTCTTTCTTTGGTGGGAGTCCCTTTGGCGGCGGTGGTAGTAGCAGAGGGAGGAGGCAGAGAAGGGGAGAAGATGTGGTTCACCCCCTCAAGGTCTCGCTTGAAGACCTATACCTGGGAACATCTAAAAAGCTCTCGCTTTCTCGCAATGTACTTTGCTCAAAGTGCAATGGCAAAGGGTCCAAGTCTGGGAATTCTACAAAGTGCGCTGGTTGCCAAGGAACTGGTATGAAGGTTTCTATCAGGCACCTTGGTCCCTCTATGATTCAGCAAATGCAGCATCCTTGCAATGAATGTAAGGGTACTGGCGAAACCATCAGCGACAGGGACCGTTGCCCACAGTGCAAAGGAGAGAAGGTTGTGCAGGAGAAGAAGGTTCTTGAGGTCCATGTGGAGAAGGGTATGCAGAACGGACAGAAGATTACATTCCCTGGTGAAGCTGATGAAGCGCCAGATACTATCACTGGGGATATTGTATTTGTCCTTCAGCAAAAGGAGCACCCCAAGTTCAAAAGGAAGGCAGAAGACCTTTTTGTAGAACACACTTTGTCCCTCACTGAGTCGCTATGTGGCTTCCAATTTGTGCTCACACACTTGGATGGCAGGCAACTCCTTATTAAATCAAACCCTGGTGAAGTTGTCAAGCCTGACTCATTCAAAGCGATTAATGATGAGGGAATGCCAATATACCAGAGGCCATTCATGAAGGGCAAGCTTTACATCCACTTCACTGTTGAATTCCCAGAGTCTTTGAACCCTGATCAGGTTAAGGCTCTAGAAGCTGTTCTGCCATCGAGGCCTTCCTCACAGTTAACAGACATGGAGCTTGATGAGTGTGAGGAGACCACACTACATGATGTCAACATGGAGGAAGAGTCAAGGAGGAAGGCACAAGCTCAGCAGGAGGCATATGAAGAAGATGATGACATGCCTGGTGGTGCACAGAGGGTACAGTGCGCCCAGCAGTAG 1272 0.4866 MFGRAPKKSDNTRYYEILGVSKNASQDDLKKAYKKAAIKNHPDKGGDPEKVTDFLDVFGLRIELIYDVQTEKREIYDQYGEDALKEGMGGGGGGHDPFDIFQSFFGGSPFGGGGSSRGRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVLCSKCNGKGSKSGNSTKCAGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETISDRDRCPQCKGEKVVQEKKVLEVHVEKGMQNGQKITFPGEADEAPDTITGDIVFVLQQKEHPKFKRKAEDLFVEHTLSLTESLCGFQFVLTHLDGRQLLIKSNPGEVVKPDSFKAINDEGMPIYQRPFMKGKLYIHFTVEFPESLNPDQVKALEAVLPSRPSSQLTDMELDECEETTLHDVNMEEESRRKAQAQQEAYEEDDDMPGGAQRVQCAQQ 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01120 423 PRINTS DnaJ domain signature 15 33 IPR001623 -
Adu03g01120 423 PRINTS DnaJ domain signature 72 91 IPR001623 -
Adu03g01120 423 PRINTS DnaJ domain signature 33 48 IPR001623 -
Adu03g01120 423 ProSiteProfiles dnaJ domain profile. 13 80 IPR001623 -
Adu03g01120 423 SUPERFAMILY Chaperone J-domain 8 114 IPR036869 -
Adu03g01120 423 Gene3D - 268 350 - -
Adu03g01120 423 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 6 423 IPR044713 GO:0006457|GO:0030544
Adu03g01120 423 SMART dnaj_3 12 69 IPR001623 -
Adu03g01120 423 ProSiteProfiles Zinc finger CR-type profile. 141 225 IPR001305 GO:0031072|GO:0051082
Adu03g01120 423 SUPERFAMILY HSP40/DnaJ peptide-binding domain 125 269 IPR008971 GO:0006457|GO:0051082
Adu03g01120 423 CDD DnaJ_C 125 352 - -
Adu03g01120 423 Pfam DnaJ C terminal domain 128 349 IPR002939 -
Adu03g01120 423 MobiDBLite consensus disorder prediction 384 404 - -
Adu03g01120 423 Gene3D - 116 266 - -
Adu03g01120 423 Gene3D - 154 220 - -
Adu03g01120 423 Gene3D DnaJ domain 10 115 IPR036869 -
Adu03g01120 423 PANTHER CHAPERONE PROTEIN DNAJ 2-RELATED 6 423 - -
Adu03g01120 423 MobiDBLite consensus disorder prediction 384 423 - -
Adu03g01120 423 Coils Coil 388 408 - -
Adu03g01120 423 CDD DnaJ_zf 154 220 IPR001305 GO:0031072|GO:0051082
Adu03g01120 423 SUPERFAMILY HSP40/DnaJ peptide-binding domain 271 360 IPR008971 GO:0006457|GO:0051082
Adu03g01120 423 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 151 223 IPR036410 -
Adu03g01120 423 Pfam DnaJ domain 14 57 IPR001623 -
Adu03g01120 423 Pfam DnaJ central domain 154 220 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01120 Adu-Chr3 12361966 12363903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01120 K09503 - gmx:547558 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01120 03 12361966 12363903 Adu03g01120 03 12361966 12363903 ECH
Adu08g01520 08 25362823 25365279 Adu03g01120 03 12361966 12363903 PCT