Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01115 ATGCTATTGATTGTGACGGATGTTGCAGCTCGTGGCATTGATATTCCGTTGCTTGATAATGTTATTAATTGGGACTTCCCTCCAAAGCCTAAGATATTCGTTCATCGTGTTGGAAGGGTTGCAAGGGCTAGCCGTACTGGCACTGCTTATTCCTTCGTGACATCGGAGGATATGGCTTACCTATTAGATCTTCATTTGTTTCTGACGAAGCCAATAAAAACTGCTCCCACCGAAAAAGAGGTCTTGCAGAATATGACTGGAGTAATGTCGAAAATTGAACAGACAATGGCAAAAGGAGAAACTGTTTATGGCTGA 315 0.4254 MLLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRVARASRTGTAYSFVTSEDMAYLLDLHLFLTKPIKTAPTEKEVLQNMTGVMSKIEQTMAKGETVYG 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01115 104 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 1 104 - -
Adu03g01115 104 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 83 IPR001650 -
Adu03g01115 104 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 75 IPR027417 -
Adu03g01115 104 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 29 1 104 - -
Adu03g01115 104 CDD SF2_C_DEAD 2 53 - -
Adu03g01115 104 Gene3D - 1 103 IPR027417 -
Adu03g01115 104 Pfam Helicase conserved C-terminal domain 2 43 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01115 Adu-Chr3 12301174 12301488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01115 2 77 Eukaryotic Initiation Factors Gene Family AT1G72730 40.789 4.08e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01115 K14808 - pop:7491254 184.496