Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01104 ATGGCAGCGTACTTTCATGGCGGCAACAATAACAACAACAGTGGCAGTTCGGATATTCATCATCATCAATCTTCCGCAGAAGGAGGGGGATTGCAGACACTGTTCCTCATGAATCCAAACAACTACGTACCTTTCTCCTCTGACACCGCACAAAATCCAACACCAAACATGCTCTTCCTCAATCCCAACAACAGTACTACTACTCCCCACGCGCTCAACCTCGCAAGTCTCTCTCACGCGCCGCCCCAACAACAAATTATCGGGGTTGCTTCAAATAATATCCTAGGACCTGCCGGCGGTGGCAATGAGATCTCCGGCTTCCATGGCTTTGTGGGGCCCACACCACGTGTTCATCACTACAATTGGAGATCCATCATGGATCAAACTGATCTTTCTTCTTCCTCTTCTTCTGTTGTTGCAGCAACCGTGACTGTTCTTCCGAATAATTATTCGGAACATACAGTGACAACTGCAACAACAGAAATGGAATTTCATAGAGCGAGAGTCCATCAATCCCATCATCATCCGCAAGGGTTGTCACTTAGTCTTTCCTCTCAACAACTTCCGTTTAGGTCTTTTTCCAACGCCGGTGGGGCTTTGAATAGTGTTGTACTTGGATCCAAGTTTCTGAAAGCGGCACAGGAGCTTCTTGATGAAGCCGTTAACGTGGGTAACGATAATAAGGTGGATTATTCCAACAATAAAGAGAAGATGAAAGGGAATAAAAATGTTGAATCCACGTCTGATGGTGGCGGTGATGATAATAGATCAAGTGGTGGCGGCAGCGGCGGTGAAAATAGTGGTGGTGACAACAAGCAAGGAAGTGAACTCAACACTGCTCAAAGACAAGAACTTCATATGAATAAGTCCAAGCTTGTTACCATGCTTGATGAGGTGGAGCAAAGATACCGAGAGTACAAACAACAAATGCAAATTGTGACGTCATCATTTGAGGAAGCAGCTGGTTATGGAGCTGCAAGAGCATACACAGCACTTGCATTGAAGACAATATCGAAGCAATTTCGGTGCCTAAAAGATGCAATTTGTTTGCAGATCAAAACGACGGGCAAGACGCTAGGTGAAGACAACTGCATGGGAGTTAAAATGGAGGGTTCAAGGCTTAGATTCATTGATCACAATCTCCGGCAACAAAGGGCGCTTCAACAGTTGGGAATGATACAACACAATGCTTGGAGACCACAAAGAGGATTGCCCGAACGAGCGGTTTCTATTCTTCGAGCTTGGCTTTTCGAACATTTTCTTCACCCTTATCCAAAGGACTCCGATAAGGTTATGCTTGCAAGACAAACTGGACTTACTCGGAGCCAGGTATCAAACTGGTTTATAAATGCCCGAGTTAGGCTATGGAAACCAATGGTTGAAGAAATGTACTTAGAAGAAATTAAGGATCAACAACACAACAACAATAATGGCTCCCAAGATGATGATGATGATGACATTGACACCACCACCAACAAGAAGAAGAAGAAGAAGCTAATAAGAGAATCATCAAACAAGGAATTATGGTCATCATCATCATCACAATTAGAACAACCACCATGTAGTAGTAGTGCCATTAGACTTGACCACTTAAACACCAACCAAAACAACACTACTCCAATGACTGAGATCTCACCAAATTCCAACAACAATAACAATTCAATCTCAACATCTCCATTGAATCTAAGGAATCCTCATCATGAGATTATGAACTCTCCAGGTAGCATCCTTTCTGTGGACATGGAAATGAAGCCGATAAGAGAGACAAATAGCAACAACAACAACAACGTCAATTTTGGAATTGAATTAGGGAACCCTAATAAAGACGGTTACCCTTTAATGGCTTCTTTTGGGAATGAAAACCACGACGGTGGCGGCGGTAGCGGTAGCGGTTATGGTTCTACTACATTCTCCATGGATGACATTGGAAGGTTCCATCAACAATTGGTGGCTCCAAGGTTCCATGGGAATGGTGTTTCACTCACTCTAGGGCTTCCACCAAGTGATAACAACAACACCAACAATAACTTTCCATCGCAACAAGTAGGGTTTCTCTCCTCACACAACATGCATTTGGGAGGAGGAAGGATTCATCATCATCATCACGAGATTGAAGCAGCAACCAATGATGACGAGTTTTGTGGAATGAAGAACAATGCCACAACACCTTCTTCTCATTCAGGAACAAGTTATGATCATAATAACAACAACATTGACATGCAAAATCCCAAGAGGTTTGCTTCTCATCAATTGTTGCGTGATTTTGTGGCCTAG 2274 0.434 MAAYFHGGNNNNNSGSSDIHHHQSSAEGGGLQTLFLMNPNNYVPFSSDTAQNPTPNMLFLNPNNSTTTPHALNLASLSHAPPQQQIIGVASNNILGPAGGGNEISGFHGFVGPTPRVHHYNWRSIMDQTDLSSSSSSVVAATVTVLPNNYSEHTVTTATTEMEFHRARVHQSHHHPQGLSLSLSSQQLPFRSFSNAGGALNSVVLGSKFLKAAQELLDEAVNVGNDNKVDYSNNKEKMKGNKNVESTSDGGGDDNRSSGGGSGGENSGGDNKQGSELNTAQRQELHMNKSKLVTMLDEVEQRYREYKQQMQIVTSSFEEAAGYGAARAYTALALKTISKQFRCLKDAICLQIKTTGKTLGEDNCMGVKMEGSRLRFIDHNLRQQRALQQLGMIQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKDQQHNNNNGSQDDDDDDIDTTTNKKKKKKLIRESSNKELWSSSSSQLEQPPCSSSAIRLDHLNTNQNNTTPMTEISPNSNNNNNSISTSPLNLRNPHHEIMNSPGSILSVDMEMKPIRETNSNNNNNVNFGIELGNPNKDGYPLMASFGNENHDGGGGSGSGYGSTTFSMDDIGRFHQQLVAPRFHGNGVSLTLGLPPSDNNNTNNNFPSQQVGFLSSHNMHLGGGRIHHHHHEIEAATNDDEFCGMKNNATTPSSHSGTSYDHNNNNIDMQNPKRFASHQLLRDFVA 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01104 757 SUPERFAMILY Homeodomain-like 399 465 IPR009057 -
Adu03g01104 757 MobiDBLite consensus disorder prediction 719 745 - -
Adu03g01104 757 MobiDBLite consensus disorder prediction 471 564 - -
Adu03g01104 757 MobiDBLite consensus disorder prediction 225 275 - -
Adu03g01104 757 MobiDBLite consensus disorder prediction 719 744 - -
Adu03g01104 757 ProSiteProfiles 'Homeobox' domain profile. 395 458 IPR001356 GO:0003677
Adu03g01104 757 Gene3D - 394 472 - -
Adu03g01104 757 Coils Coil 289 316 - -
Adu03g01104 757 Pfam Homeobox KN domain 415 454 IPR008422 GO:0003677|GO:0006355
Adu03g01104 757 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 25 685 - -
Adu03g01104 757 CDD homeodomain 398 459 IPR001356 GO:0003677
Adu03g01104 757 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 25 685 - -
Adu03g01104 757 SMART HOX_1 398 462 IPR001356 GO:0003677
Adu03g01104 757 MobiDBLite consensus disorder prediction 1 26 - -
Adu03g01104 757 MobiDBLite consensus disorder prediction 244 275 - -
Adu03g01104 757 MobiDBLite consensus disorder prediction 505 564 - -
Adu03g01104 757 Pfam Associated with HOX 203 348 IPR006563 -
Adu03g01104 757 SMART prehox3 198 350 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01104 Adu-Chr3 11986388 11993489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01104 1 757 Homeobox Transcription Factor Family AT2G35940 38.958 9.75e-118 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Adu03g01104 POX 1.6e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01104 - - aip:107629786 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01511 08 25215827 25219771 Adu03g01104 03 11986388 11993489 PCT