Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01092 ATGAGATATGTGTTGAAGAAAATCAGGCTTGCTAGGCAGACTGAAAGATGCAGAAGATCTGCACATCAAGAGATGGCTCTTATTGCTAGAATCCAGCATCCTTACATTGTAGAATTCAAGGAGGCATGGGTTGAGAAGGGTTGCTATGTCTGTATTGTTACTGGATACTGTGAAGGAGGAGACATGGCCGAATTGATGAAGAAAACAAATGGTGCTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAGTTACTCCTGGCAGTGGAATATCTTCATTCAAATTTCGTTTTACATCGTGACCTAAAGTGTTCCAACATTTTTCTTACCAAGGACCAAGATGTTCGCCTCGGGGATTTTGGGCTCGCTAAGACGCTAAAAGCAGATGATTTGGCTTCATCGGTGGTCGGGACTCCCAATTACATGTGTCCTGAACTGCTTGCGGATATTCCTTATGGATTCAAATCTGATATCTGGTCACTAGGGTGCTGTATATATGAGATGGCTGCTCATCGCCCGGCTTTTAAAGCTTTTGATATGGCAGGACTAATAAGCAAGATAAACCGTTCCTCTATTGGCCCGTTGCCTCCTTGTTATTCCCCTTCCTTGAAAACACTGATAAAGGGCATGCTAAGAAAAAGTCCGGAACATCGGCCAACAGCATCAGAAGTGTTAAAGCACCCTTACTTGCAACCTTATGTTGATCAATATCGTCTGTCTTTTAGTTCTCCAACATCATGTTCTCCAGGAAAACCGATTTCAGCTGTCAATTATTCTAGAAAAAATATGGCTGAAAGTCAAAGCAGTACTAGTTCAAGCAGTGACAAAGACAGTTTGATGTCACATGAGAGACACATTGCAACATCAGTGCCCGAGCATAACAAAGCCACTGAAACAGATATGGCATCAATTGATGACGATAGCTCAGAGAATCTCCTGGCTAGTGAAGAAGAAAACGGCTCTAGTAATGTCAATGCTAAAGCAACTGAGCAAGAAGTGACAAAACCATCTTATAATGAGCCATGTTCTAATATTGAATCTAAGCAGCCGAAAACAATTAGAAGTATAATGATGGCGTTAAAAGAAGGAAAACTTAGAGAAGCAACTTCTCCGATGAGAGGCAATCGCATAAAGGTTGGTGGTGTATCAACACCGAAGACTAATATAGACACGTTGTCCAAATTGCCAAAACCCAATTTCACAGCTCCTGGATTGAAGCCAAATGTAGAGTCCCCAGCTGGTGCGCATCCAAAGGGATCCCCGGACTCTGTAAAACGAATACAAGGATTGCATCCTTCAAAGCATCAGTTGCCAGTGACAGAATCCTCACCAAAAGCGAAACCTAGGCACGACTTGACTTCGCCATCTGGCAATGTCAAACCAGTAGAGGAAGAAGGACTTCCTGATAGAACATTGCAAAGGACTCCCCCTACCTTAACTAGACGACCTTCATTTCCGGCTCGAATGAGGCCAGTTGGGCTTGATGTTCCGAATGCAACAAATGATAATGGGAAGTCAGGTTCAAATAAAACAGCTCAGGATCCTGACATTAGCCGTCAGTTGACCAATGGCAATGTACCACATCTTTCTAGACCGGCTGCTAGAGAGCCTCAGAAGGCTTTTGGCCGAAGCTCCAAAGGAATGCAAACAGACAGCAGTAATTCCGCATCATCTTCGGTCTCTATTCAAGGATGTGAAATTTATGATGATGCAACAATTTTTATTGACATGAGAGAAGAAACACTTCCTGATAGCGAGAATGTACTCCACGATGTAGGTGCAGAATCATGCCCACCTACAACCTGTGCACATTGTAAGAAGGTTGAAAACGTTTGCAACAAGACTGGCGAGGTTACCTGGAGTTTTCGGAACACTAATAGTAATGAGAAAATGGATTCAAGGATAAGTCTTGATCTCCCTATTGAAGATTCTGAGGTTACTTCTGCATCAGAAGATAGCCTTCCTGTTAAACATACAAGTATCAATGTTTCCTTTGGATCTGATAATAAATCTGTAGGCCCTCGTGTTGAAGCCGCAGAGGAAATCATAGATCATCATGATATTTCTAAGGAAATAACATTAGCCACAACTATCCAACATCCACTTGAAAGTTCTGCAGAAAAGCCGGTTTATGGCGGTGTTCTTCCACTAAGGAAGTCTGAAGGTAAGTCCGAAATCGTTTGTCAGCCGGAACCCATGTGTAAGTCCTCTGGGGACGACAAATCCACAATGAGGGAGCGATTATCATCAGTGTCTGAAACTGCTCCGCTGATTACATCTACTAAGCTATCGAGCCAGAAAGTCTTGCAAGAGAAAGGAACTGTTGTGCAGAATCCAGCACCGGAAAAGCCAGATGCTGGCCATCTCCCTCCGGCCTTTGATGTCATCCATGTAATACGGCATAGCAGTTACCGGGTTGGAAATGAGCAGCCAGTTAAGGAATCTGTTGAGAAAGGAGTTCAAAATTTAGATGTTGGTAAGTTCATCAATGTTGTGAGGGATGATGTAGAAGCAAGAAATTCAAGCCCTCCTTTGACATTGAAATCTTCTAGTTCCTCTGAACCTCCGAGCACGAAACCAAATACTTCTGATCAGTTCGAAACAAGAGACAATGGCACTCTGCCAACCGTTAAATCTCCAAGTTTATATGATGCTTCATGCATGAAATCAAGTGTGTCTGATCATCCTGGTCTTAAGGAACAAGACGAAAGCAACCCGGTTTCATTAGTTTCAGAATCTAATTCCACCGAGTTAAGTAAACACGATACTCCTACAACCGAAGACAAACCTCCGGCGAAGGAAATACTGGATGTGAAATCTTTCAGGCAGAGAGCCGAGGCACTCGAAGAGCTCCTAGAATTGTCTGCGGAGTTGCTGCAGCAAAATAGATTGGAGGAACTTCAAGTTGTTCTGAAGCCCTTCGGGAAAGACAAGGTTTCGCCAAGGGAGACAGCGATTTGGTTAGCGAGAAGTCTTAAAGGAATGATGTCCGAGGAATGCGGAGGACGCGGTTCATGA 3021 0.4346 MRYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKTNGAYFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKSPEHRPTASEVLKHPYLQPYVDQYRLSFSSPTSCSPGKPISAVNYSRKNMAESQSSTSSSSDKDSLMSHERHIATSVPEHNKATETDMASIDDDSSENLLASEEENGSSNVNAKATEQEVTKPSYNEPCSNIESKQPKTIRSIMMALKEGKLREATSPMRGNRIKVGGVSTPKTNIDTLSKLPKPNFTAPGLKPNVESPAGAHPKGSPDSVKRIQGLHPSKHQLPVTESSPKAKPRHDLTSPSGNVKPVEEEGLPDRTLQRTPPTLTRRPSFPARMRPVGLDVPNATNDNGKSGSNKTAQDPDISRQLTNGNVPHLSRPAAREPQKAFGRSSKGMQTDSSNSASSSVSIQGCEIYDDATIFIDMREETLPDSENVLHDVGAESCPPTTCAHCKKVENVCNKTGEVTWSFRNTNSNEKMDSRISLDLPIEDSEVTSASEDSLPVKHTSINVSFGSDNKSVGPRVEAAEEIIDHHDISKEITLATTIQHPLESSAEKPVYGGVLPLRKSEGKSEIVCQPEPMCKSSGDDKSTMRERLSSVSETAPLITSTKLSSQKVLQEKGTVVQNPAPEKPDAGHLPPAFDVIHVIRHSSYRVGNEQPVKESVEKGVQNLDVGKFINVVRDDVEARNSSPPLTLKSSSSSEPPSTKPNTSDQFETRDNGTLPTVKSPSLYDASCMKSSVSDHPGLKEQDESNPVSLVSESNSTELSKHDTPTTEDKPPAKEILDVKSFRQRAEALEELLELSAELLQQNRLEELQVVLKPFGKDKVSPRETAIWLARSLKGMMSEECGGRGS 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01092 1006 MobiDBLite consensus disorder prediction 263 277 - -
Adu03g01092 1006 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 2 837 - -
Adu03g01092 1006 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 910 989 - -
Adu03g01092 1006 Gene3D Phosphorylase Kinase; domain 1 1 56 - -
Adu03g01092 1006 MobiDBLite consensus disorder prediction 382 396 - -
Adu03g01092 1006 MobiDBLite consensus disorder prediction 843 889 - -
Adu03g01092 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 98 110 IPR008271 GO:0004672|GO:0006468
Adu03g01092 1006 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 2 837 - -
Adu03g01092 1006 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 910 989 - -
Adu03g01092 1006 SUPERFAMILY Protein kinase-like (PK-like) 2 286 IPR011009 -
Adu03g01092 1006 CDD STKc_Nek 3 231 - -
Adu03g01092 1006 MobiDBLite consensus disorder prediction 376 560 - -
Adu03g01092 1006 MobiDBLite consensus disorder prediction 263 346 - -
Adu03g01092 1006 Pfam Protein kinase domain 3 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01092 1006 SMART serkin_6 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01092 1006 MobiDBLite consensus disorder prediction 278 292 - -
Adu03g01092 1006 Gene3D Transferase(Phosphotransferase) domain 1 59 337 - -
Adu03g01092 1006 Coils Coil 943 969 - -
Adu03g01092 1006 MobiDBLite consensus disorder prediction 307 346 - -
Adu03g01092 1006 MobiDBLite consensus disorder prediction 500 528 - -
Adu03g01092 1006 MobiDBLite consensus disorder prediction 544 560 - -
Adu03g01092 1006 MobiDBLite consensus disorder prediction 839 932 - -
Adu03g01092 1006 ProSiteProfiles Protein kinase domain profile. 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01092 1006 MobiDBLite consensus disorder prediction 905 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01092 Adu-Chr3 11668694 11674388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01092 5 232 MAP Kinase Kinase Kinase AT1G53570 32.609 2.44e-33 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Adu03g01092 Pkinase 1.6e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01092 K08857 - gmx:100818747 1328.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01499 08 25063679 25069385 Adu03g01092 03 11668694 11674388 PCT