Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01063 ATGCAGCCCAGTAGTAGTGGCAGTGGCGGTGGTGGTAGCAGCGGTGGTGTTGCCAGGTTCCGTTCAACTCCAGCGAGCTGGTTAGAATCAATTTTTGTCAAGGAAGAAGTGGAAGGAGAAGGAGAAGAAGAAGCTGATCCTCCGGCGTTGAATAGCAGCAGCAGCAGCATCCACCAGCAGGGATTCACTCAGCTTCTTTCCGGTGACACAAGCGGGGTTTTCCGCCACAATAGTTCTCCCGCCGATTTTGTATTCGACTACTCTCAACAATACGTATCCTCCAACTACGACTACGACTACGCCTACGCTTCTCCGGATAACAGCAGCGCGAATAATCCAATCCCGCAGGAAATTAAGCAGAGAGGGGTGAAAGTGGAGAATAAGATTATGAAGGATTCTGTGCCTTGGAAAGTTCGAGCAAAGCGTGGCTGTGCTACTCATCCTAGGAGTATTGCTGAAAGGGTTAGGAGGACTCGTATCAGTGATCGTATCAGGAAGCTGCAGGAACTTGTGCCAAACATGGATAAGCAAACTAATACTGCAGACATGTTAGATGAGGCAGTAGCTTATGTCAAGTCTCTCCAAAAGCAAATTGAGGAACTATCGGAGCAGCAACGGAGATGTAATTGTGTGGTTCAAAGGAGTAGATAG 651 0.4839 MQPSSSGSGGGGSSGGVARFRSTPASWLESIFVKEEVEGEGEEEADPPALNSSSSSIHQQGFTQLLSGDTSGVFRHNSSPADFVFDYSQQYVSSNYDYDYAYASPDNSSANNPIPQEIKQRGVKVENKIMKDSVPWKVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKSLQKQIEELSEQQRRCNCVVQRSR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01063 216 MobiDBLite consensus disorder prediction 1 20 - -
Adu03g01063 216 PANTHER TRANSCRIPTION FACTOR BHLH117-RELATED 12 208 - -
Adu03g01063 216 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 212 IPR036638 GO:0046983
Adu03g01063 216 MobiDBLite consensus disorder prediction 32 59 - -
Adu03g01063 216 Coils Coil 184 211 - -
Adu03g01063 216 Gene3D - 145 215 IPR036638 GO:0046983
Adu03g01063 216 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 194 IPR011598 GO:0046983
Adu03g01063 216 Pfam Helix-loop-helix DNA-binding domain 149 195 IPR011598 GO:0046983
Adu03g01063 216 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 12 208 - -
Adu03g01063 216 SMART finulus 150 200 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01063 Adu-Chr3 11272070 11274332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01063 72 211 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 50.898 4.07e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu03g01063 HLH 7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01063 - - adu:107477635 375.941