Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu03g01053 | atgtgCAATCGACGGAGAGACTCACCTCATTCTTTCGACTCTCTTATTCTGCCGCTTCTTTCTCGCCGGCGGTTTTCTCCTCTCTGCCGCCTCAATTTTCCGGTGATCAGCTCCGTTCGCAGCCACAGGCAAAGGGAGCAACAAAGCCTCTGGAATGATTTGTTATGGCCCAACAGTCATCTAGGCTTCAGCGGTTGCTTACTCTGTTGGATACTGGGTCAACCCAAGCGACAAGACTTGAACAGTCTTCTTAAGAAGGTTTCTCAATATCTGCGCAGCAAAAATTGGGAGACAAGAGTCGCTGCTGCTCATGCAATTGGGTCTATTGCTGAGAATGTTAAACACACAAGTTTGAATGAACTTACTACATCTGTTGTATCAAAAATATCTGAGAATGGGATATCATGTAGTGTTGAGGATCTTTGTGCATGGACATATTTGCAATCAAGAATTACAGGAAGCTCATTTAGAAGTTTTGACATGAGCAAGGTGCTTGAATTTGGAGCTTTATTAGCATCTGGAGGACAGGAATATGATATTGTAAGTGATAATATAAAGAACCCAAAGGAGCGACTGGTACGCCAAAAGCAAAATCTTCGACGCCGTTTAGGTTTGGATGTTTGTGAACAATTTATGGATATGAGTGATGTAATAAGAGATGAAGATCTTATGACACACAAGTCAGATTCACATCCCAATGGAATAGATCATGGAGTTTTTACTTCTTCTTCTGTGCATAACATCCAGAAAATGGTTGCAAACATGGTTCCTAGTGTCAAATCAAAGTGGCCAAGTGCAAGAGAACTGAATCTTCTAAAGCGCAAAGCAAAAATAAACTCAAAGGACCAGACAAAAAGCTGGGTCGAAGATGGTGTTACCGATCCATCAGGTGCTCAGAATTCGGCTTCGAAAGCCACGTATCCTGAGTCAGTTAATTACAATAAGGTATTCATGGATGTTAATCATGATGATGATGGCCTTGACCATGATGGGGATGGACAATGGCCTTTCCACACTTTTGTTGAGCAACTTATTATTGATATGTTTGATCCAGTTTGGGAGATCCGACATGGTAGTGTGATGGCACTGAGAGAAATTTTAACACATCAAGGTGCTTCTGCTGGGGTATTGAAACATGACTTACGCTTGGGTGGGAACTTTATGGTCGAATTAGAAGACAAAAGTATAACTATTGAAAAAAAAGAAGACAGTAGTATGTCAAATATATTGAAGAGAGAGAGGGAGATTGATTTGAATATGCAAGTTTCTGCAGATGAGTTTGACTCAAACTTGAAGAGACCAAAACTTGAAAATGTAACATCATCAACCTCGATGGATAGTCTAATTACTTGCAGCAATGAAGGTGATACTAAAATCAGCATTAGTTCTGAAACCTCTGGGTACAATTTACCTTTGGATTGTGTAAATGGGCAATTTAATTGTAATTCTGTTGAGATGGATGTGGTATCTTTCTCTGATGGACTGCAAGATGCATGCAAGGAACCTACTATTGTAGCAGAGCAGAAGGGTTATTCTGAAGAGATTCCCTCCAGAAATCTTAATGTGCTGAGAAATGTTCCCCAGAATTCCGAGCTGATGAGCATGGTTAAAGTTGCCAGAAGTTCATGGTTGCGAAACTGTGGATTTCTTCAAGATTGTGTGATACGCTTTTTGTGTGTGTTGTCACTAGACCGCTTTGGAGATTATGTATCCGATCAGGTTGTTGCTCCAGTGCGTGAAACCTGTGCACAGGCATTAGGTGCGGCATTTAAGTACATGCATCCGGCACTGGTAAATGAAACATTGAATATATTGTTGAAAATGCAGTGTAGACCAGAATGGGAGATTCGTCATGGAAGTCTTCTAGGTATCAAATATTTGGTTGCTGTGCGGCAGGAGTTGCTACCTGACTTGCTTGGACTTGTTCTTCCTGCATGTAAATCTGGGTTGGAGGACCCGGATGATGATGTCCGAGCTGTTGCTGCTGATGCCTTAATACCAGCTTCAGCTGCAATCGTTGCATTGCAGGGTCCAACATTGCGCACAATTGTGATGCTGCTGTGGGATATATTGCTTGATTTGGATGATTTAAGTCCATCCACTAGCAGTGTTATGAATTTGCTGTCAGAAATTTATTCTCAAGAAGAGATGGTCCCAATGATGTATGAAGTTCTTAGATTGGGAGACAACGGAATATCTATTCAAAATGGAGTCGGGGGTGGTGATGATGATGATGATGATGAAGAAAATCCTTATGTGCTTTCAACGTTGGCACCACGTTTGTGGCCTTTTATGAGGCATAGTATCAGCTCTGTCCGGTATTCAGCAATGCGGACTCTGGAGAGGCTACTTGAAGCTGGATATAAGAGAAGAATGTCCGAGTTGTCTAATGCTTCGTTTTGGCCCTCTATCATATTTGGAGATACCCTTAGAATTGTATTTCAGAATCTGCTATTGGAAACAAATGAGGATATTTTGCAATGTTCAGAGAGAGTGTGGAGTCTCCTTGTTAAGTGTTCTGTGGAGGACTTGGATACTGCTGCGAGATCTTACATGGCTTCTTGGATAGAACTTGCTTCTACACCATTTGGTTCAGCATTAGATGCCTCAAAGATGTTTTGGCCTGCTGCATTTCCAAGGAAAAGTCAATTTAGAGCTGCTGCTAAAATGAGAGCTGTGAAGTCTGAATATGATTATGGTGGGGATTTTGGTCTTGATTCTACAAAAGGATCTGTTCCACAAGAAAGAAATGGTGATGCTGCTATGGATTCAGTGAAGATAGTTGTTGGTGCTGATGTGGACACATCTGTTACTCATACACGGGTGGTTACAGCAACTGCATTGGGAATTTTTGCCTCTAAGCTGCCAGAGGATTCTTTGAAGTATGTTGTTGATCCACTCTGGAGGTCTCTAACCTCTTTGTCTGGTGTTCAACGTCAGGTTGCATCTATGATGCGTAATGAGGCTGGTCAATTGCTAAATGCTATCAAGTCTTCTGGTATGTTTGATGAGTTATTGTCAACTACCAAAATTGAGTTGGATAGCTTGAGTGTGGATGGTGCCATTAGTTTTGCATCAAAAGTTCCAGCAGTGTGTAATGATAGTTCTCTGAATGAGTCCTTGATAAAGAATACTTTAGATGATATAGAATCCACAAAACAGAGGCTCTTGACAACTTCTGGCTATTTGAAATGTGTGCAGAGTAATTTGCATGTTACAGTCTCATCTGCAGTTGCAGCTGCTGTTGTTTGGATGTCTGAATATTCTTCTCGGCTTACCCCAATCATTTTGCCTTTGATGGCTTCAATCAGACGAGAGCAGGAGGAAATACTGCAAATGAAGTCAGCTGAAGCACTTGCTGAGCTAATATATCATTGTGTTGCTCGTAGGCCATGCCCAAATGATAAGTTAATTAAAAATATATGCAGTATGACATGCTTGGATCCTTCCGAGACCCCTCGAGCTAAACTCATTTGCTCCATGGAGAGTATTGATGACCAAGGTCTTCTGTCGTTTGGAACTCCTGTGAGCAAACATAAATCAAAGGTCCATGTTTTGGCTGGTGAAGATCGATCAAAAGTGGAAGGGTTCATAAGTAGACGTGGGTCGGAATTAGCGTTGAGGCTTTTGTGCGAGAAGTTTGGTGCTTTGTTATTTGATAAGCTTCCTAAGCTGTGGGATTGCCTTACTGAGGTGCTTAAACCTAGCTCCTCTGAATCTCCAGCAGTCACTAATGAAAAACAAGCTACTATGGCTGTTGAGTCTATTAGTGATCCCCAGATATTGATTAACAATATTCAGGTGGTACGATCTATTGCGCCCTTGTTAAATGAGGAGTTAAAGCCAAAATTATTGACACTTCTCCCGTGCATTTTTAAATGCATTCAACATTCTCATGTTGCAGTTAGATTAGCTGCTTCACGCTGCATCACTTCCATGGCCCGGTCAATGACTGTGAAAGTTATGAGTGCTGTGGTTGAAAATGCTATCCCAATGTTGGAAGATGCATCATCAGTTCATGCTCGTCAAGGAGCAGGCATGTTGATTAATTTTCTTGTTCAGGGCCTGGGGGTAGAGTTGGTCCCTTACGCTCCATTGTTGGTAGTTCCACTTCTAAGGTGCATGAGTGACTGTGATCAGTCTGTCAGGCAGAGTGTGACCCATAGTTTTGCTGCTCTTGTGCCTTTACTTCCTTTGGCACGAGGCCTTCCTCAACCAGTTGGATTGGGGGAAGGTATATCTAGAAATGCTGATGATTTGCAATTTTTGGAGCAACTGCTTGACAACTCCCACATTGAAGATTACAAGTTATGCACTGAATTGAAAGTCACATTGAGAAGGTACCAACAAGAAGGCATAAATTGGTTAGCTTTTTTGAAACGTTTCAAGCTTCATGGAATTTTATGTGATGACATGGGGCTTGGTAAGACGCTTCAGTCATCGGCTATTGTGGCCTCTGATATTGCTGAGCATCGAACTCAGTCTGGGAATGGAGATCTTCTACCATCTTTGATTATTTGCCCATCAACCCTAGTTGGACACTGGGCCTTTGAGATAGAGAAATATATTGATGTTTCAGTTATATCTTGTCTTCAGTACGTTGGTTCTGCTCAGGACCGAATGATTCTTCGAGATCATTTTTGCAAGCATAACGTCATTATAACATCATATGATGTTGTCCGTAAAGACATCGATTATTTGGGACAGCTTCTGTGGAATTACTGCATTTTAGATGAAGGGCATATAATCAAGAATGCTAAGTCCAAAGTTACACTTGCTGTAAAGCAGTTAAAAGCCCAACACCGCTTGATATTGAGTGGGACTCCAATACAGAATAACATCATGGACTTGTGGTCCCTTTTTGATTTTCTAATGCCTGGATTTCTTGGAACAGAGAGACAGTTCCAAGCAACATATGGAAAACCGCTTTTAGCTGCTAGAGATCCAAAATGCTCAGCCAAAGATGCCGAAGCAGGAGCACTTGCTATGGAGAGATTGCATAAGCAGGCTATGCCTTTTCTCCTTCGTAGAACAAAGGATGAGGTCTTATCTGATCTTCCGGAGAAAATAATTCAAGACAGATACTGTGATTTGAGCCCTGTACAATTTAAACTCTATGAACAGTTTTCTGGTTCTCACGTAAAACAAGAAATGTCATCTATTGTGACAACGAATGAGTCAGCTGGAGCAGAAGGAAGCAGCAGTTCAACTAAAGCATCTTCACATGTTTTCCAGGCACTTCAATACTTGCTGAAGCTGTGTAGTCATCCATTGCTTGTCATCAATGATAAGGTTTTAGATTCACTTTCGACCATCCTCTCCGGAGTGTTACCGGGTGTTTCTGACATCATTTCAGAACTTCACAACCTCCATCATTCGCCAAAATTAGTTGCTCTTCAGGAGATTCTTGAAGAGTGTGGAATTGGAGTTGATGCTTCTGGTTCTGAGGGTTCTGTTAACGTTGGGCAGCACAGGGTATTGATATTTGCTCAACACAAGGCTTTTCTGGATATAATAGAAAGAGATTTGTTTCAGACACACATGAAAAATGTTACATACTTGCGGCTAGATGGATCAGTTGAGCCAGAAAAGCGTTTTGACATTGTCAAAGCATTCAATTCAGATCCTACCATTGATGTCTTACTGCTTACAACACACGTGGGTGGGCTTGGTTTGAACCTGACATCTGCAGATACCCTTGTTTTTGTGGAGCATGACTGGAATCCAATGCGAGATCATCAGGCCATGGATAGAGCGCACAGGTTAGGTCAGAAAAAAGTTGTTAATGTCCACCGTCTAATAATGCGTGGTACTTTGGAAGAGAAGGTTATGAGTCTGCAAAGGTTTAAAGTGTCTGTGGCTAATGCTGTGATTAATGCGGAGAATGCTAGCATGAAGACTATGAATACGGATCAGTTGCTTGATTTGTTTGCTTCAGCAGATACCTCCAAGAAGGGTTCTTCTGCCGGGAAGAGTTTGGAAAACAACCCTGAAGGAGACGCTAAACTAGTAGGTACCGGAAAGGGGCTGAAAGCCATACTTGGGGGATTGGAAGAGCTATGGGACCAATCACAATACACAGAAGAGTACAATCTAAATCAATTCTTAGCAAAACTAAATGGTTAA | 6126 | 0.4166 | MCNRRRDSPHSFDSLILPLLSRRRFSPLCRLNFPVISSVRSHRQREQQSLWNDLLWPNSHLGFSGCLLCWILGQPKRQDLNSLLKKVSQYLRSKNWETRVAAAHAIGSIAENVKHTSLNELTTSVVSKISENGISCSVEDLCAWTYLQSRITGSSFRSFDMSKVLEFGALLASGGQEYDIVSDNIKNPKERLVRQKQNLRRRLGLDVCEQFMDMSDVIRDEDLMTHKSDSHPNGIDHGVFTSSSVHNIQKMVANMVPSVKSKWPSARELNLLKRKAKINSKDQTKSWVEDGVTDPSGAQNSASKATYPESVNYNKVFMDVNHDDDGLDHDGDGQWPFHTFVEQLIIDMFDPVWEIRHGSVMALREILTHQGASAGVLKHDLRLGGNFMVELEDKSITIEKKEDSSMSNILKREREIDLNMQVSADEFDSNLKRPKLENVTSSTSMDSLITCSNEGDTKISISSETSGYNLPLDCVNGQFNCNSVEMDVVSFSDGLQDACKEPTIVAEQKGYSEEIPSRNLNVLRNVPQNSELMSMVKVARSSWLRNCGFLQDCVIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGAAFKYMHPALVNETLNILLKMQCRPEWEIRHGSLLGIKYLVAVRQELLPDLLGLVLPACKSGLEDPDDDVRAVAADALIPASAAIVALQGPTLRTIVMLLWDILLDLDDLSPSTSSVMNLLSEIYSQEEMVPMMYEVLRLGDNGISIQNGVGGGDDDDDDEENPYVLSTLAPRLWPFMRHSISSVRYSAMRTLERLLEAGYKRRMSELSNASFWPSIIFGDTLRIVFQNLLLETNEDILQCSERVWSLLVKCSVEDLDTAARSYMASWIELASTPFGSALDASKMFWPAAFPRKSQFRAAAKMRAVKSEYDYGGDFGLDSTKGSVPQERNGDAAMDSVKIVVGADVDTSVTHTRVVTATALGIFASKLPEDSLKYVVDPLWRSLTSLSGVQRQVASMMRNEAGQLLNAIKSSGMFDELLSTTKIELDSLSVDGAISFASKVPAVCNDSSLNESLIKNTLDDIESTKQRLLTTSGYLKCVQSNLHVTVSSAVAAAVVWMSEYSSRLTPIILPLMASIRREQEEILQMKSAEALAELIYHCVARRPCPNDKLIKNICSMTCLDPSETPRAKLICSMESIDDQGLLSFGTPVSKHKSKVHVLAGEDRSKVEGFISRRGSELALRLLCEKFGALLFDKLPKLWDCLTEVLKPSSSESPAVTNEKQATMAVESISDPQILINNIQVVRSIAPLLNEELKPKLLTLLPCIFKCIQHSHVAVRLAASRCITSMARSMTVKVMSAVVENAIPMLEDASSVHARQGAGMLINFLVQGLGVELVPYAPLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGLPQPVGLGEGISRNADDLQFLEQLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQSSAIVASDIAEHRTQSGNGDLLPSLIICPSTLVGHWAFEIEKYIDVSVISCLQYVGSAQDRMILRDHFCKHNVIITSYDVVRKDIDYLGQLLWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQATYGKPLLAARDPKCSAKDAEAGALAMERLHKQAMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQFKLYEQFSGSHVKQEMSSIVTTNESAGAEGSSSSTKASSHVFQALQYLLKLCSHPLLVINDKVLDSLSTILSGVLPGVSDIISELHNLHHSPKLVALQEILEECGIGVDASGSEGSVNVGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFDIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENASMKTMNTDQLLDLFASADTSKKGSSAGKSLENNPEGDAKLVGTGKGLKAILGGLEELWDQSQYTEEYNLNQFLAKLNG | 2041 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu03g01053 | 2041 | Pfam | Helicase conserved C-terminal domain | 1821 | 1923 | IPR001650 | - | |
| Adu03g01053 | 2041 | MobiDBLite | consensus disorder prediction | 283 | 305 | - | - | |
| Adu03g01053 | 2041 | Gene3D | - | 1193 | 1403 | IPR011989 | - | |
| Adu03g01053 | 2041 | MobiDBLite | consensus disorder prediction | 289 | 305 | - | - | |
| Adu03g01053 | 2041 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 1457 | 1627 | IPR014001 | - | |
| Adu03g01053 | 2041 | Pfam | SNF2-related domain | 1463 | 1759 | IPR000330 | GO:0005524|GO:0140658 | |
| Adu03g01053 | 2041 | Gene3D | - | 1418 | 1676 | IPR038718 | - | |
| Adu03g01053 | 2041 | Gene3D | - | 1687 | 1999 | IPR027417 | - | |
| Adu03g01053 | 2041 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1430 | 1677 | IPR027417 | - | |
| Adu03g01053 | 2041 | PANTHER | TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172 | 984 | 1973 | IPR044972 | GO:0003677|GO:0016887|GO:0017025 |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu03g01053 | K15192 | - | vvi:100247209 | 2612.02 |
Showing 1 to 1 of 1 entries