Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01050 ATGGCCAACACTCCCATTCTCTTTCACTTCTTCAAACTGTTGTTGCTCACTTCCTACTTCATTTTCCCGCCATGTGGATCTCAATCCTTGGAAGCCAAAGCTCTCCTTGAGTTCAAGAACCATTTGAATGACCCCTTGAATTGTTTGGGTTCATGGAATGAATCAGTGTCTCCATGTGAGTTTGTTGGAGTGAACTGTGATGCATTCTCAGGGAAGGTGACAGAAATCTCAGTAGAGAATAAGTCCCTCTCTGGTGTCCTTTTCCCATCAATCTCAGTTCTTCAGAGCCTGCAAGTGTTGTCACTGCCATCAAACATGATCTCTGGAAAACTTCCAGTGGAAATAAATAGATGCACCAACCTAAGAGTGCTGAATTTGACAGGAAATCATATGGTTGGAACCATCCCAGACTTGTCTATGCTGAGGAACCTTCAGGTTCTTGATCTTTCAGCAAATTACTTCACTGGGAGAATCCCAAGCTGGGTTGGGAACCTAACTGCCCTTGTGTCACTGGGCCTTGGGGTGAATGAGTTCACTGAGGGTGAGATTCCAGACACACTTGGAAATCTCAAGAACTTGACTTGGTTCTATCTTGGTGGTTCACATTTGATAGGAGAGATTCCTGAATCATTGTATGAACTGAGGGCATTGCAGACACTTGACATTTCAAGGAACAGGATCTCTGGGAAAATTTCCAGATCAATTTCCAAGTTAGAGAATCTGTACAAGCTTGAGCTTTTCTCGAATAACTTGACAGGAACAATCCCAGCTGAGTTTGCAAACCTGACCAATCTGCATGAGGTTGACATGTCTTCAAACCACTTGTTTGGTAAGTTACCAGATGAAATTGGTCATATGAAAAACTTGACTGTCTTTCAAGTGTATGGTAACAACTTGTCTGGAGAGCTTCCTGCTGGATTTGGGGAGATGCAGAGTCTTGTTGGGTTCTCAGTTTATAGAAACAGCTTCACCGGGACAATTCCGGAGAATTTTGGCCGTTTTTCACAGCTTGAGAGTATTGACATCTCTGAGAATCAATTCTCAGGTGATTTCCCAAAGTTCTTGTGTGAAGGAAGGAAGTTGGTATTTTTGCTTGCATTGCAAAACAATTTCTCTGGGAATTTTCCCGGGTCTTACGCCTCGTGCAAGTCTCTGTTGAGATTAAGGATTAGTGGTAACCAATTATCTGGGAAAATTCCAGATGGTGTTTGGGCACTTCCAGATGTAAAAATAATTGATTTGGCTTACAATGATTTCAGTGGTGAGATATCTTCAGAGATTGGGTTTTCTACCAACTTGAGTGAGTTAGTTTTGACACAGAACAAGTTTTCTGGTAAGCTGCCATCAGAACTTGGCAATCTGGTGAACCTTGAGAAGCTTTACTTGAACAATAATACTTTCTCTGGAGAAATACCACCTGAAATGGGATCACTGAAGCAACTCTCTACTTTGCATCTGGAACAGAATTCCTTAACTGGACCAATACCTGAAGAATTGGGTGATTGTCCAAGGCTAGTAGACTTGAATCTTGCATGGAATTCTCTCTCTGGAAACATACCCCAGTCAATTTCACTTATGAGCTCATTGAACTCTCTTAATCTATCTGGAAACAGACTTTCCGGTTCTATTCCGGATAATTTAGAGACACTGAAACTGAGCTCTGTGGATTTTTCTCAAAACCTGTTTTCTGGGAGGATCCCATCTGGTCTTCTGATTATTGGAGGAAAGCAAGCTTTTCTTGGGAACAAGGGACTTTGTGTTGAGGAAAATTTTAGACCTCCCATGAATCCTGATTTGAGAATCTGTGCTGAAAGTCATGGTCAGAAAAGGCTTTTTGCTGATAAATTTGTCTTGTTCTTTCTCATTGCTTCTATTTTTGTCATTGCTTTAGCTGTGTTGCTGCTTTTGAATCGTGGAAACCTCAAGCATATTATTGCGGATAAGAACTTGAATGGTCAAGATGAATCAAGTCAAAAATGGAAACTTGCATCTTTCCACCAAGTAGATATCGATGCGGATGAAATATGCAAATTGAATGATGATAATTTAATTGGAAGTGGCAGTACAGGGAGGGTTTATCGAGTGGAGTTGCGAAAGAGTCACGCCACAGTTGCTGTAAAGAAACTAGGCAAAGGTGATAATGTGAAGATTTTAGCTGCAGAGATGGAGATTCTGGGGAAAATTAGACATAGGAATATACTTAAGCTCTATGCTTGTTTAGTAAAAGGAGGGTCCAATTTTTTGGTGTTTGAGTACATGCCAAATGGTAATCTTTTTCGTGCTCTACACAGAGATATTAAAGATGGGAAGCGGGAGTTGGATTGGAACCAGAGGTATAAGATTGCTCTGGGAGCCGCAAAGGGAATTTCCTATTTACACCATGATTGTTCTCCACCTATTATTCATAGGGATATAAAATCAAGCAACATCTTGCTTGATCAGGATTATGAGCCCAAAATAGCTGATTTTGGTTTTGCAAGGTTGGCAGAAAAATCCAGTGACCAATTGGGTTATAGCTGTGTTGCTGGTACACATGGTTATATAGCACCAGAACTTGCTTATACACTTGACATAGATGAAAAGAGTGATGTTTACAGCTTCGGAGTGGTGCTATTAGAATTGGTTTCAGGCAGAGAACCAATTGAAGAGGATTATGGAGAGGCAAAGGACATTGTATACTGGGTTTTGACTCATCTGAATGACAGAGAAAGTGTTGTTAACATCCTTGATAACAGGTTGGTATCCAAGTCTGAAAACGATATGATAAAAGTGTTGAAGATTGCTATAAAGTGTACAACTAAGCTTCCATCTCTGCGCCCAACAATGAGAGAGGTTGTCAACATGCTCACTGATGCTGAGCCATGCACATTGAAATCTCCTCTCAAAGATGAACAAGAGGCTCCTTTAACAAGTGATTTTCTTTAG 2925 0.4079 MANTPILFHFFKLLLLTSYFIFPPCGSQSLEAKALLEFKNHLNDPLNCLGSWNESVSPCEFVGVNCDAFSGKVTEISVENKSLSGVLFPSISVLQSLQVLSLPSNMISGKLPVEINRCTNLRVLNLTGNHMVGTIPDLSMLRNLQVLDLSANYFTGRIPSWVGNLTALVSLGLGVNEFTEGEIPDTLGNLKNLTWFYLGGSHLIGEIPESLYELRALQTLDISRNRISGKISRSISKLENLYKLELFSNNLTGTIPAEFANLTNLHEVDMSSNHLFGKLPDEIGHMKNLTVFQVYGNNLSGELPAGFGEMQSLVGFSVYRNSFTGTIPENFGRFSQLESIDISENQFSGDFPKFLCEGRKLVFLLALQNNFSGNFPGSYASCKSLLRLRISGNQLSGKIPDGVWALPDVKIIDLAYNDFSGEISSEIGFSTNLSELVLTQNKFSGKLPSELGNLVNLEKLYLNNNTFSGEIPPEMGSLKQLSTLHLEQNSLTGPIPEELGDCPRLVDLNLAWNSLSGNIPQSISLMSSLNSLNLSGNRLSGSIPDNLETLKLSSVDFSQNLFSGRIPSGLLIIGGKQAFLGNKGLCVEENFRPPMNPDLRICAESHGQKRLFADKFVLFFLIASIFVIALAVLLLLNRGNLKHIIADKNLNGQDESSQKWKLASFHQVDIDADEICKLNDDNLIGSGSTGRVYRVELRKSHATVAVKKLGKGDNVKILAAEMEILGKIRHRNILKLYACLVKGGSNFLVFEYMPNGNLFRALHRDIKDGKRELDWNQRYKIALGAAKGISYLHHDCSPPIIHRDIKSSNILLDQDYEPKIADFGFARLAEKSSDQLGYSCVAGTHGYIAPELAYTLDIDEKSDVYSFGVVLLELVSGREPIEEDYGEAKDIVYWVLTHLNDRESVVNILDNRLVSKSENDMIKVLKIAIKCTTKLPSLRPTMREVVNMLTDAEPCTLKSPLKDEQEAPLTSDFL 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01050 974 Pfam Protein kinase domain 680 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01050 974 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Adu03g01050 974 Gene3D Ribonuclease Inhibitor 183 236 IPR032675 -
Adu03g01050 974 Gene3D Phosphorylase Kinase; domain 1 677 756 - -
Adu03g01050 974 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 962 - -
Adu03g01050 974 SUPERFAMILY L domain-like 353 569 - -
Adu03g01050 974 ProSitePatterns Protein kinases ATP-binding region signature. 684 708 IPR017441 GO:0005524
Adu03g01050 974 ProSiteProfiles Leucine-rich repeat profile. 120 142 IPR001611 GO:0005515
Adu03g01050 974 ProSiteProfiles Leucine-rich repeat profile. 528 551 IPR001611 GO:0005515
Adu03g01050 974 ProSiteProfiles Protein kinase domain profile. 678 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01050 974 Gene3D Transferase(Phosphotransferase) domain 1 757 966 - -
Adu03g01050 974 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR2 9 962 - -
Adu03g01050 974 Gene3D Ribonuclease Inhibitor 314 594 IPR032675 -
Adu03g01050 974 Gene3D Ribonuclease Inhibitor 237 313 IPR032675 -
Adu03g01050 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Adu03g01050 974 Pfam Leucine rich repeat 216 275 IPR001611 GO:0005515
Adu03g01050 974 SMART serkin_6 678 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01050 974 CDD STKc_IRAK 684 950 - -
Adu03g01050 974 Gene3D Ribonuclease Inhibitor 28 182 IPR032675 -
Adu03g01050 974 SUPERFAMILY Protein kinase-like (PK-like) 677 949 IPR011009 -
Adu03g01050 974 SMART LRR_typ_2 478 502 IPR003591 -
Adu03g01050 974 SMART LRR_typ_2 526 550 IPR003591 -
Adu03g01050 974 SMART LRR_typ_2 94 118 IPR003591 -
Adu03g01050 974 SMART LRR_typ_2 454 477 IPR003591 -
Adu03g01050 974 SMART LRR_typ_2 214 238 IPR003591 -
Adu03g01050 974 SMART LRR_typ_2 262 286 IPR003591 -
Adu03g01050 974 SMART LRR_typ_2 141 165 IPR003591 -
Adu03g01050 974 SUPERFAMILY L domain-like 46 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01050 Adu-Chr3 11094230 11098945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01050 20 959 Receptor kinase-like Gene Family AT1G72180 55.848 0.0 1025
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu03g01050 Pkinase 9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01050 - - gmx:100789704 1437.17