Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01047 ATGACTCCAGTGAATTTGGCAGGGCAGTTCGGAGACACCACATACACCAAGGTTTTTGTTGGAGGCTTGGCTTGGGAGACTCAGAAAGAGACCATGAAGAAATACTTTGAGCAATTCGGTGAGATCTTGGAAGCTGTTGTCATCACTGACAAAGCCACCGGAAGATCCAAAGGCTACGGTTTTGTCACGTTTCGCGAACCAGAAGCTGCCATGAGAGCTTGTGTGGATGCTGCTCCAGTAATTGATGGAAGAAGAGCTAACTGCAACCTTGCTTCTTTGGGTGTCCAGAGATCTAAGCCTTCAACACCAAAGCATGGTCCGGTAATGGGGTCTTTCCAGACCGGGTTTGGAGGGGGAGTGGGATCAGCTTTTCCATCGGCAGCAACCTTCCCTCATTATGCTATCCAGCAAGGGATACCATATAACGTTTATGGGTACTCTCCTTACTCACCGGATTACACTTACCCCACGAGCTACTACAGTGTGTATGGAGGTGCAGCAACAGCACAGTACCCAGTGTATGGAACGGGACATGCTGGAGGGATGATGACGGGTGCCGGGGCAGCAGCGGCGGCGGCAGCAGCCACCGCGTTTTATCCGTATATGCAGTACGGAGGAGAAGGGAGTGGCGGAGGTGGATCAAGCGGCGGGAGCTATACTACTTCAGGGCAGGGTTATGGTGTGAATTATCCGCCTCATCAACTGTTTCAGTATTCTCCGATTGCTTCAACCGGTGGCTATGCTCAGCACTATGCAACTCCCATGTCCCTTGCTCCTTCCCCTGCCTTGCAATCAGGCGTGACAATGGCTCTTCAAGCTCCAATTCCTCACCGCTAG 837 0.5197 MTPVNLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGPVMGSFQTGFGGGVGSAFPSAATFPHYAIQQGIPYNVYGYSPYSPDYTYPTSYYSVYGGAATAQYPVYGTGHAGGMMTGAGAAAAAAAATAFYPYMQYGGEGSGGGGSSGGSYTTSGQGYGVNYPPHQLFQYSPIASTGGYAQHYATPMSLAPSPALQSGVTMALQAPIPHR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01047 278 PANTHER BOULE-RELATED 1 273 IPR037366 GO:0003729
Adu03g01047 278 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 73 IPR000504 GO:0003723
Adu03g01047 278 Gene3D - 10 97 IPR012677 -
Adu03g01047 278 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 100 IPR000504 GO:0003723
Adu03g01047 278 SUPERFAMILY RNA-binding domain, RBD 12 120 IPR035979 GO:0003676
Adu03g01047 278 SMART rrm1_1 17 89 IPR000504 GO:0003723
Adu03g01047 278 CDD RRM_RBM24_RBM38_like 16 91 - -
Adu03g01047 278 PANTHER OS01G0876800 PROTEIN 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01047 Adu-Chr3 11036901 11041704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01047 12 92 C2H2 Transcription Factor Family AT2G19380 43.210 3.75e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01047 - - adu:107477578 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01047 03 11036901 11041704 Adu03g01047 03 11036901 11041704 ECH