LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu03g01026	ATGCTACACTTCGCTGGTGAAGCATGCGGCATTCATTCAAACAAACCCTGTTCTTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGTCCACGATGGCGAGGAGCGGTGGCCTGAGCGGGAGAGACGCGGCGGCTATGCAGGACTGCATGGAGGTGCTGGCTGATTCCGTGGAGGAGCTCACAAAATCGATTGGAGAAATGAGTCATTTGAGGACAAGTAATTTTGAAGGAACAATGAGTGATGTTCAAACTTGGGTCAGCGCTGCTTTGACCGATGATACCACCTGCACTGATGGCTTCCAACAGACCCCTAGTTCTGTCGCCGAAGATGTTAAGACCGCCGTCCGTGGCCGCGTCGTCGAGGTGGCGCAACTCACTAGTAATGCCTTGGCTTTGATCAATCAGCTCGCTAATGGCCATCCTTAA	450	0.4667	MLHFAGEACGIHSNKPCSSXXXXXXXXXXXXXXXXXMSTMARSGGLSGRDAAAMQDCMEVLADSVEELTKSIGEMSHLRTSNFEGTMSDVQTWVSAALTDDTTCTDGFQQTPSSVAEDVKTAVRGRVVEVAQLTSNALALINQLANGHP	149

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu03g01026	149	Gene3D	Invertase/pectin methylesterase inhibitor family protein	32	146	IPR035513	-
	Adu03g01026	149	PANTHER	PECTINESTERASE INHIBITOR 10	36	143	-	-
	Adu03g01026	149	PANTHER	PECTINESTERASE INHIBITOR-LIKE	36	143	-	-
	Adu03g01026	149	SMART	PMEI_2	32	140	IPR006501	GO:0004857
	Adu03g01026	149	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	37	144	IPR035513	-
	Adu03g01026	149	CDD	PMEI-like_3	37	146	-	-
	Adu03g01026	149	Pfam	Plant invertase/pectin methylesterase inhibitor	46	140	IPR006501	GO:0004857
	Adu03g01026	149	TIGRFAM	PME_inhib: pectinesterase inhibitor domain	39	144	IPR006501	GO:0004857

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu03g01026	Adu-Chr3	10689198	10690282	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu03g01026	49	140	Carbohydrate Esterase	AT5G53370	38.043	2.03e-12	61.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu03g01026	-		-	gmx:100305537	151.754

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu03g01026	03	10689198	10690282	Adu03g01026	03	10689198	10690282	ECH