Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01023 ATGAATAGTTTTTGTCATGTTCCCCCGGGTTTTAGATTCCACCCCACGGATGAAGAACTTGTTGATTACTACCTTAGGAAGAAGGTTAGTTCAAGGAAGATTGAGCTTGATGTAATCAAAGATGTTGACCTCTACAAAATTGAGCCATGGGACCTTCAAGAGATATGCAGGATAGGAAGAGAAGAGGAGAATGAATGGTACTTCTTTAGCCACAAGGATAAGAAGTATCCAACAGGAACAAGAACAAATAGGGCAACAGCAGCTGGGTTTTGGAAAGCAACGGGAAGAGACAAAGCTATATATTCAAAGCATGATCTCATAGGGATGAGGAAGACATTAGTCTTTTATAAAGGTAGAGCTCCTAATGGACAAAAATCCGATTGGATCATGCACGAATATCGCCTTGAAACTGATGAAAATGCCGCACCACAGGAAGAAGGATGGGTGGTGTGTAGAGTATTCAAGAAGAGAGTAACAACGATGCGTAAAGTGATGATGAGAGAGCATGATGAGTCTCCTAATTCTTCTTGTTGGTACGATGAGCAAGAATTGATGATGATGGAATCGCCAACAAAGCAACAATCCTCTATTCTTCTTCATCAATCCACCAATAATAACCATTCCAATTTGATGCAGCTACCACCATATCCTCTCATCAAGAAAGAGCTTCATCACCCATCATCATCATACCCCTTCCTTCAGCTTCCACTCTTAGAGTCTCATCAACAATCTGCTGCTGCACCTTCCTCCATTTCTGAACAACTCATCATGCCACCACCAATTGGAGGAGGAGGAGGAGAACAAGTCCCTAGTTTTCAGTCATTCTTCAATAATGAACAACAAGAAGTAGGAGTTCTTGATTGGAGAGTTCTTGACAAGTTTGTTGCTTCACAACTTAGTCAAGATGATAATCATGCATCCTCTAATAGTATTGTACAAGATCTCACACAGGAAATTGTTATGGTGCCTCACAATGATGCTGCATCAACATCAAACTCCCTCACCTGCCCAATTGATTTGTGGAAATAG 1029 0.4111 MNSFCHVPPGFRFHPTDEELVDYYLRKKVSSRKIELDVIKDVDLYKIEPWDLQEICRIGREEENEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENAAPQEEGWVVCRVFKKRVTTMRKVMMREHDESPNSSCWYDEQELMMMESPTKQQSSILLHQSTNNNHSNLMQLPPYPLIKKELHHPSSSYPFLQLPLLESHQQSAAAPSSISEQLIMPPPIGGGGGEQVPSFQSFFNNEQQEVGVLDWRVLDKFVASQLSQDDNHASSNSIVQDLTQEIVMVPHNDAASTSNSLTCPIDLWK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01023 342 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Adu03g01023 342 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Adu03g01023 342 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Adu03g01023 342 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 317 - -
Adu03g01023 342 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Adu03g01023 342 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01023 Adu-Chr3 10589549 10590747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01023 1 342 NAC Transcription Factor Family AT1G12260 56.319 1.92e-125 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu03g01023 NAM 9.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01023 - - gmx:100815845 406.757