Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00969 ATGGAAGAAGGGGAGTTAGAACCTGAGCCTGCTCCTGCTCCTGTTCCTCAGGCTGAACCAGAGGCGGCTCTCAAAGTTGCTTCTGAAAGTGAAGAACGCAAGGATTCTGCCCTTTTGGAGAATGCTGAGAAGGAAGTCATGAATGAATGTGAGGTCAATGCTACAAAGGCTGCAAAGGGCGATACACAATTATATGAGGAAAAACCTAATATGGACATTGATTCTGAGGTGAAAAATGCAGAAAAGGAAGCCGATAAGGTGCAAGATGTTCAAGACAATCCTGCGAAGGATGTTCCTGTTGCTAATACTGAAGTCAAACTGGCTCGTGATGTTGTTAATAGAAAAGAGGAGTGTTTGAAGGCTGACGATTCTGAGTGCAAGGAGGAAACAAAGAAGGATGCATATTTGGCGATGTCTGTGGTTAACGAAGAGGAGCAGAAACAGGACAAGGCTGTAGATTTAAAAGCTAGCGCAGGTCTTGACAAACCAGAGTTAAATGATGAAGTCTCAAAAGAGAATGAAGCTCCAAAAGAAGTGAATAGGGAATTCATGGCGGAGGGTGTGGCCAACAACATCAAGGATAAAGGGAAAAGCGTCTCTGTTACCCCAACTAATGTTGCCCATTCTTCAGAAGATGGCTTGTGGACTGATAGAGGATCAAGAGATCTTGCCACATGCTCTGCTGATGTTATGGACGGCCCTAGCACCAGAGGATTCGAGTTATTTTCTAGATCTCCTGTCAGAAAACCGGAGAAAAAGGAGCAGTCAGGTCTCAGCAAGAAGGATGATGGTCTTGGAATGGAGCAGCTTGATCTTTCTCTTAGCTTACCAAATGTTCTGTTACCTATTGGTTCTCATGAGATGGCAACGCAAGCCCCTGGATCCCCCAGTCAAGCTCGGAGTGTGCAGTCTTTAAGTACTACATTTTGTACCAACTCAGATGGTTTTACTGCATCAATGTCTTTTTCAGGTTCCCAATCTCTCTACCACAATCCAAGCTGTTCTCTAACAAAAAATGTAGTTGACTATGAACAATCTGTTGGCAGCCGCCCCTTATTTCAGGGAATTGATTGGCAAAGCCTATCTCAGAATGATCCCAAACATAAAGAAGTTCCTTATAGCAAGATAACTTCTGCAAATGGAAATGGTTCATTTTACCAATCTCAAGCATCATGGGGTGTTTTAGATGGTCAAGTTGTGAAGGGTCAACAATCTAGGGTCCTAGAAGGAAGCTCAAAAATGGGCAGCGGACTTGACAGGCAATTGAGTTTTCAGAAGCAGTTTTCGGGACAGTCAAGACGCCATGATGATGTTAGATCTCCTACACACAGTGCTGGGTCTCATGACATTGGGTCAAATTATAGTCGTGAGAAAAAGGGGGAAGCCAAGGATAGGAGTAGTGGTAGTTTGTATCGAACTACTAGCCAAAAGGAGCAAGAACAAATTCTGATGGGTGGAATTGACTTTGTTGAGACTATCATTGCAAAACTGGTTTCTGAACCAGTGAATGCGACGACTCGAAAGTTCCATGAAATGGGAGGACAGCCTGTAGCGTTTCTGAAGGAGGGCATTAGGGAAATCATGCTTAATCCAGATAAGCACGGGCAAATACTTGCTTTTCAAAAAGTTCTGCAGAATAGGTCTGACATAACCGTGGATGTCTTACTAAAGTGTCATCGAGTACAACTGGAAATTTTGGTTGCTTTAAAAACTGGTTTAACCCATTATCTTCACATAGACAACAGCATTCCATCTTCTGATTTAGCTCAAGTTTTTCTGAACCTAAGATGTAGGAATCTTTCATGTCGAAGCCAATTGCCTGTGGATGAATGCGATTGCAAGGTTTGTACACAGAAGAGTGGTTTTTGCAGGGAATGCATGTGTCTGGTGTGTTCTAAGTTTGACAACGCATCAAATACATGTAGTTGGGTTGGGTGTGATGTTTGCCTTCACTGGTGTCATACTGACTGTGGGTTACGGGAGTCTTATATTAGAAATGGTCACAGTACTACTGGGACAAGAGGAATGACAGAGATGCAGTTTCATTGTATTGCTTGTGATCACCCGTCTGAGATGTTTGGCTTTGTCAAGGAGGTGTTTCAAAATTTTGCAAAAGATTGGCCAGTTGAAACCCTCTGCAAGGAGCTTGAATATGTGAAGAGAATTTTTAATGCCAGCAAGGACATGAGAGGGAGACAACTGCATGAGATTGCAGATCAAATGCTACCAAGGCTGGTAAACAAGTCGAACCTTTCTGAGGTTTTGAGGCACGTAATGTCTTTCCTTGTTGATGGGGATTCTTCCAAATTAGCCATGGCTACAAACTTATCTGGGAAGGAACGAAGTAAGGAAATCAAAGGGGTAGCTGGGCCAAGCCAGGAAGCTTCTTGGCTGAAATCTACTTATTCGGAGAAGAAACCTGTGTTAGAAAGGCCAGCAAACATCCTTACCAGCTTTGATCAAAATGATAAAAGGACACTGGCGCCTGAGCTGCAAATGAGCATTGTCCCAAAAGACTTCTGTTTTGATGAATTGGAGAGTGTAGTTAAAATCAAACAAGCAGAGGCTAAAATGTTTCAGTCACGTGCTGATGATGCAAGAAGAGAAGCTGAAGGGTTGAAACGTATTGCCCTTGCAAAGAGTGAGAAAATTGATGAAGAGTATACTCAGCGAATTGCGAAGCTGCGACTGGGTGAGACAGAGGAAATGCGTAGGCAGAAACTCGAAGAACTTCAAGCATTAGAACGGGCACATCTGGAGTATTTCAACATGAAAAGGAGAATGGAGGCAGACATTAAAGATCTTTTATCTAAAATGGAAGCTACTAAAAGGAGTCTTGCCCTGTGA 2847 0.4306 MEEGELEPEPAPAPVPQAEPEAALKVASESEERKDSALLENAEKEVMNECEVNATKAAKGDTQLYEEKPNMDIDSEVKNAEKEADKVQDVQDNPAKDVPVANTEVKLARDVVNRKEECLKADDSECKEETKKDAYLAMSVVNEEEQKQDKAVDLKASAGLDKPELNDEVSKENEAPKEVNREFMAEGVANNIKDKGKSVSVTPTNVAHSSEDGLWTDRGSRDLATCSADVMDGPSTRGFELFSRSPVRKPEKKEQSGLSKKDDGLGMEQLDLSLSLPNVLLPIGSHEMATQAPGSPSQARSVQSLSTTFCTNSDGFTASMSFSGSQSLYHNPSCSLTKNVVDYEQSVGSRPLFQGIDWQSLSQNDPKHKEVPYSKITSANGNGSFYQSQASWGVLDGQVVKGQQSRVLEGSSKMGSGLDRQLSFQKQFSGQSRRHDDVRSPTHSAGSHDIGSNYSREKKGEAKDRSSGSLYRTTSQKEQEQILMGGIDFVETIIAKLVSEPVNATTRKFHEMGGQPVAFLKEGIREIMLNPDKHGQILAFQKVLQNRSDITVDVLLKCHRVQLEILVALKTGLTHYLHIDNSIPSSDLAQVFLNLRCRNLSCRSQLPVDECDCKVCTQKSGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHSTTGTRGMTEMQFHCIACDHPSEMFGFVKEVFQNFAKDWPVETLCKELEYVKRIFNASKDMRGRQLHEIADQMLPRLVNKSNLSEVLRHVMSFLVDGDSSKLAMATNLSGKERSKEIKGVAGPSQEASWLKSTYSEKKPVLERPANILTSFDQNDKRTLAPELQMSIVPKDFCFDELESVVKIKQAEAKMFQSRADDARREAEGLKRIALAKSEKIDEEYTQRIAKLRLGETEEMRRQKLEELQALERAHLEYFNMKRRMEADIKDLLSKMEATKRSLAL 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00969 948 Coils Coil 849 876 - -
Adu03g00969 948 MobiDBLite consensus disorder prediction 425 475 - -
Adu03g00969 948 Pfam PHD - plant homeodomain finger protein 597 720 IPR032881 -
Adu03g00969 948 MobiDBLite consensus disorder prediction 1 43 - -
Adu03g00969 948 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 882 904 IPR004082 -
Adu03g00969 948 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 634 654 IPR004082 -
Adu03g00969 948 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 547 562 IPR004082 -
Adu03g00969 948 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 707 726 IPR004082 -
Adu03g00969 948 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 588 609 IPR004082 -
Adu03g00969 948 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 843 863 IPR004082 -
Adu03g00969 948 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 562 577 IPR004082 -
Adu03g00969 948 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 508 530 IPR004082 -
Adu03g00969 948 MobiDBLite consensus disorder prediction 25 43 - -
Adu03g00969 948 PANTHER PROTEIN OBERON 4 1 947 - -
Adu03g00969 948 MobiDBLite consensus disorder prediction 195 211 - -
Adu03g00969 948 MobiDBLite consensus disorder prediction 144 181 - -
Adu03g00969 948 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 947 IPR004082 -
Adu03g00969 948 Pfam Coiled-coil region of Oberon 820 936 IPR032535 -
Adu03g00969 948 Coils Coil 70 90 - -
Adu03g00969 948 MobiDBLite consensus disorder prediction 244 265 - -
Adu03g00969 948 MobiDBLite consensus disorder prediction 144 265 - -
Adu03g00969 948 CDD PHD_OBE1_like 627 686 - -
Adu03g00969 948 Coils Coil 925 945 - -
Adu03g00969 948 Coils Coil 897 917 - -
Adu03g00969 948 MobiDBLite consensus disorder prediction 80 100 - -
Adu03g00969 948 MobiDBLite consensus disorder prediction 452 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00969 Adu-Chr3 9917415 9922315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00969 597 745 PHD Gene Family AT5G57380 27.517 2.33e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00969 - - gmx:100817003 1333.93