Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00952 ATGCATCGACGGAGGAGACAACAGAAAAAGAGATTATCAAAGCATGCGGTGGCGGCAAGGACACAAATGGATATAGTGGTGGTGATGGTGGTGGCGATGGAGGCGGCGATAGCTGTTTTAAAAATTCCCACTAAAAAACCTCTACTAATTATTAAAAACCTTGTAGTGTCGTCGGAGGTGCTCGCGCGGAAGGGATACGACGGCGCCAAGGCCAATATATGGTCTTGCGGCGTCATCCTGTTTGTGCTTCTTACAGGTTGCTTGCCTTTTCAGGACGATAACCTTTTTGCGATGTACAAGAAGATTTATAGAGGAGATTTCAAGTGTCCACGGTGGTTCTCCGGCGATGCAAGGAGGCTCATCACCAAGCTGCTCAATCCGGATCCGAATTCTCGCATCATCATTTCGAAAATCATGGAGTCACCGTGGTTCAAGAAACCTGTTCCGAAGAACATGCTACGGGGGATGAAGGAGGAAGATGAAGAGGAGAAGGAGAAAGAGATAGAGGAGAAGATGAAGCAGCCATCGACGATGAGCGCGTTTCTCATAATATCGTTATCCGAAGGGTTTGATTTGTTGAGGTTGTTTGAGGAGAAGAAGAGGGAAGGAAGAGAGGGAGGAGATGAGGTTTGCGACGGCGGGAACGGCGAGCAGCGTGATATCTCGACTGGAGGAGGTGGCAAACGCGATGAAGTTCGATGTAAAGAGGAGCAGCAATGA 720 0.4861 MHRRRRQQKKRLSKHAVAARTQMDIVVVMVVAMEAAIAVLKIPTKKPLLIIKNLVVSSEVLARKGYDGAKANIWSCGVILFVLLTGCLPFQDDNLFAMYKKIYRGDFKCPRWFSGDARRLITKLLNPDPNSRIIISKIMESPWFKKPVPKNMLRGMKEEDEEEKEKEIEEKMKQPSTMSAFLIISLSEGFDLLRLFEEKKREGREGGDEVCDGGNGEQRDISTGGGGKRDEVRCKEEQQ 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00952 239 SMART serkin_6 3 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g00952 239 Coils Coil 150 170 - -
Adu03g00952 239 MobiDBLite consensus disorder prediction 201 239 - -
Adu03g00952 239 PANTHER - 56 203 - -
Adu03g00952 239 ProSiteProfiles Protein kinase domain profile. 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g00952 239 MobiDBLite consensus disorder prediction 223 239 - -
Adu03g00952 239 Pfam NAF domain 175 201 IPR004041 GO:0007165
Adu03g00952 239 SUPERFAMILY Protein kinase-like (PK-like) 57 151 IPR011009 -
Adu03g00952 239 Pfam Protein kinase domain 57 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g00952 239 MobiDBLite consensus disorder prediction 201 215 - -
Adu03g00952 239 ProSiteProfiles NAF domain profile. 173 197 IPR018451 GO:0007165
Adu03g00952 239 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 6 56 203 - -
Adu03g00952 239 Gene3D Transferase(Phosphotransferase) domain 1 53 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00952 Adu-Chr3 9760107 9761027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00952 56 196 CBL-interacting serine-threonine protein kinases AT4G30960 58.333 9.10e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Adu03g00952 Pkinase 8.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00952 - K07198 ahf:112772715 262.307