LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu03g00921	ATGTGTAGAGCCTTACTCTCTTCTTTGCTTCATGATTTGATGGACAACCTTCTCTACCTCACCTCTCAAACCAAACATTTCATGATGAAGCCACACAAATACCAGCGCAAGCTCATGGATAAATTGCTGATCCTTGATGCTCTTGTGGATGATGCCGAACAGAAGCAGTTCACAGAAGGAACCAATGCACAAGCAGTGAAAGGTTGGTTAAATGAACTAATACATGCTTCATACCAATTGGAGGAGCTTCTGATGCAGATCATGGCCACCATTAAGTCTCCGCATTCGCAGGGCCAGCAATTCTTCAAAGTCATCACAACAACAAAGAAGCCGGACAAGTATATCATGGCTCGAATCAACGAATCTCTTGAGAACTTAGAATCTCTGGTGAAAAAGAAAGATGTTCTTGGATTAACTGAGCATGCTACTTGGAGGGAATCGTTGCAAGGATTGCCTTCGTCTTCTGATGTGTTGGATAATTATTTCTATGGAAACTATCCAAAAGATTACTTCTATGGAAGAGAGGAAGAAGAGAAATCTATATTGGAAAACTTGTTATCAGCTAGTGAAAGTGATGAACACATCAAGGTGATTAACATTGTGGGAAAATCCGGGGCAGGAAAAACTGCTTTGGCTGATGTTGTTTACTTCAACCACAAGGTAAGGGAGTCTTTTGAACTTAGAGCTTGGATCACTGTTCCTTACAAGGCCACTGCTACCTTCATTGCAAAGAAGATTCTCCAGGCAGTTACCGAGGAGTTTGTTGCCGGAGAAGACTTCGATGTGTTGTGGAAGAGATTGCAAGAAAGCCTTGATGGGAAGAAGTTTCTGTTGGTGTTGGATGATATCAGGATTGAGGATGAATTACACAAATGGAGAAAGCTGATTGCTTCCCTTGAATCTTCTGCAGCAAAAGGTAGTTCCATAATCCTAACATCAAGTCCTCATGATGATCCAAAGCTACTGATGTTACCTGCAAATCATGATGTGCATGTGAGTTTCCTTTCAATACACAATTGTTGGTCAATCTTTTTGGTGCATGCTTTTGGTCAAATAGACCTTCATCAACACCCGGAACTAGCCGCAGTTGGCAAAGAAATCGTCAACAAACTGGGAAACCTTCCCCTGGCTGCAAAAATGATAGGGAGTCTCTTACAAGATAAGTTGCATATCAACCAATGGGTTCAGATCTTGAGGAGCGAATTGCTGGATGCAGGGGATGTGGATCTACCCATCCCTTCATTTCTAGTACTCTGTTATCTCGATCTCCCTGCGCAGCTTAAGCGATGCTTTGCTTATTTGTCATTGTTTCCAAAGGGCTACGAGTTCAAGCAGAAGGAGGTGATCCTCTTATGGATGGCCCAAGGCTTTCTGAATGACTCTGACTCTAAATCCAATGGAAAAAGCATGGAAGACATTGGTGATGAGTACTTTGGTTATCTAATCATGAGGTCTTTCTTGCAACCCTTTGGCTCTGGTGTTAGTTTCATAATGCATAATCTGGTTCATGACTTGGCAAGCTATGCATTTGGAGAATCATACAAGCACCATTTGTCCTATTCAAGAAGCACAGAAGATTTTCCAGAATTATCCTTTTACAAACATGGAGAATTGTCAAGAACCATTTTACCTATATACTTGCCACTTGAAGGGGCTCCTAGGTGGTTCGACTCGTCGCTGCTTGAGCAAATAATTATGAAGGTGAATCCACATGTCTTCCGGGTCTTATCCTTATCACACTATGATATCACTCACTTGCCTGCTTCAATTGGAAGACTAAGTTGTCTTAGTTACTTTGATCTCTCTCACACTGCATTGCAGACACTGCCAGATTCCATTTGTGATCTGCTTAGTTTGCAAACACTTCTGTTGACAAACTGCACTTCTCTCACAAGTCTCCCCAAAAGGATATGCAATTTGGTAAATTTGCGTTACCTTGATGTTAGAGATAGTGGCCTGCAGGAGATGCCGTTGGAAATGCATAAATTGACAAGTCTCCGGGCATTGACAGACTTTATTGTTTCCAAATATGTTCCAAGGTTTGGAGATTTAGCAGGGATGTACAATCTCAAAACATTGACCATTTCGAAGTTGGAAAATGTGGTCTATGCTAAGAATGCATCAGATGCCAAACTAAAAGAGAAAAAGACCCTTGATGAACTTATGCTTCAATGGAGCAATGGCAAACACAGCAATGGGAATGAAATGGAAGTGCTTGAGAGTCTAGAACCACATAAAGACTTAAAGAGACTAACAGTTGAGTACTACAATGGTGCAAGTTTCCCAAATTGGTTAGGAGATAAATCTTACTGGGATTTACAGCTAGTAGATCTCCGCCACTGCGAAAATTGCAATTCATTGCCAACATTGGGGATGCTGCCATTTCTTAAAGACCTCTTCATTGAAGGGTTCACTCAAGTAAGTTCCATAGGTGCTGAGTTTTATGGGGTGGCAACTGCTTCACAAAAGCCATTTCAATCTTTAGAGAGATTACAATTTCAGGATATGCTGGAATGGAAGGAATGGAGCATATTAGAAGGCATTGAATTCCCTTGTCTTGTTGAGCTATATATAATACGGTGTCCTAAACTAGTGCGAGATTTGCCAAAGCAGGTTCTTTCTTTGGAAAAGTTGGAGATTTTTGGATGCTATGCCCTTGAAGCTCCACTTCCCAAAGTCTCTGATAAATGTCAAGTGTTTGTGCATGACAGCAATGACATTGTTATGAGAAATATAGCTAAAACCCACTCGCAACCATCCTTGCGCCGGGTCAAAATTTCAGAAGAAGTGCATGAGATCACAGTGCAATCCTTCTCTGGTTTTCCAAGCACTAAGTACACTGTTGGTTCTTCTTTAGGTGAGATTGAAGAAATTGCTCATGAAGAAAGGATGGAGAGTGAATCCACAAGAAGCAGATGGCCACTTGATTCTTCATCTTCAGATACATTAAGGATACCGAAACTAAAGGAAACTTCCTCTAGAATTATCAGTCACCAAGTTGAAGCGAACATTCCCAACATCAAACAGCAAAAAGATCCACAATCTTCAGATACTAAATTTGATACTCCAATCACCACACAAGCAGCTATCAAGGTAGAAACTTCATCAAAAGAAGACTTAGATGATCAAAGATCATCCTTTGAAATGCTAAAGATTTCAACTGTGTCACAATTGAAGTCATTGCCAACCAAGCTGCACAGCCTAAAAGTTGAAGGGTGTGAGTCCTTAGAGTCCCTTCCAAATGACTTATTGGAAGGGATAACTACTCTTGAAGAATTGTATCTGATTAGTTGCTCTTCTCTTAGATCCCTCCCTTCCCTTGGTTCTGTCACAACACTTTATATACGAAACTGCAGAAGATTGGAGAATCTGCCATCTTTAGAATCAAGAAAGCAGCTTGCCTGTCTCCACCACTTGTTCATAGGGAGTAGCTGTGATTCTCTCACTTCTTTGACCTTAGATTTGTTCCCCAAACTCAAAATTCTCTGTATATGGGATTGTCTCAACCTGCAATCATTTAATGTCACTAAGGAGTACAAGGGTGATCTTCCATCACTTGAGTCTTTAGAGATTAGAGATTGTCCAGGATTGATGTCTTTTCCAGAGGGAGGAATACATGCTCCAAATCTAGAATCCATATTCCTTTCCAATTGCAAGAATCTGAACAATTTGCCAGATGCTATGAACTCTCTAACATCCCTCAGGACATTATTTCTACATAAATGTCCAGAGATTGAATGTATTCCCTATGGGGGCTTGCCTTCAAGTTTAATTTTACTCTCCATAGCTTATTGTGACAAACTTACACCACAAAAGAATTGGAGATTGGACACTCTTGAGTCTCTCAACCGCTTGGAGCTTGAAGGTGGATGCATAGGCATGGATTCATTTCCAGAGGACATGATACTTCCTCCCAATATAAACTCACTTTGCATAAGCACACTGAAGAGTCTCAAGAAGCTAAACTACAGTGGGTTCCAACATCTGAATGCTCTTCAAACACTTGAAATTCATTGCTGTGGCATGCTTTGTTCCTTACCTGATCAAGGCCTTCCTTCCTCCCTAAATCAACTCTGTGTCCAAGAATGCCCTTTGCTGACTCCAAGACTTAAACCAAATAGTGGGAAGGAGCGGCACAAGGTGGCTCGAATCCCACACATACAAATTGATCACCAAATCCTCTATTGGAACCAGTGCCAAAGCTAG	4206	0.4113	MCRALLSSLLHDLMDNLLYLTSQTKHFMMKPHKYQRKLMDKLLILDALVDDAEQKQFTEGTNAQAVKGWLNELIHASYQLEELLMQIMATIKSPHSQGQQFFKVITTTKKPDKYIMARINESLENLESLVKKKDVLGLTEHATWRESLQGLPSSSDVLDNYFYGNYPKDYFYGREEEEKSILENLLSASESDEHIKVINIVGKSGAGKTALADVVYFNHKVRESFELRAWITVPYKATATFIAKKILQAVTEEFVAGEDFDVLWKRLQESLDGKKFLLVLDDIRIEDELHKWRKLIASLESSAAKGSSIILTSSPHDDPKLLMLPANHDVHVSFLSIHNCWSIFLVHAFGQIDLHQHPELAAVGKEIVNKLGNLPLAAKMIGSLLQDKLHINQWVQILRSELLDAGDVDLPIPSFLVLCYLDLPAQLKRCFAYLSLFPKGYEFKQKEVILLWMAQGFLNDSDSKSNGKSMEDIGDEYFGYLIMRSFLQPFGSGVSFIMHNLVHDLASYAFGESYKHHLSYSRSTEDFPELSFYKHGELSRTILPIYLPLEGAPRWFDSSLLEQIIMKVNPHVFRVLSLSHYDITHLPASIGRLSCLSYFDLSHTALQTLPDSICDLLSLQTLLLTNCTSLTSLPKRICNLVNLRYLDVRDSGLQEMPLEMHKLTSLRALTDFIVSKYVPRFGDLAGMYNLKTLTISKLENVVYAKNASDAKLKEKKTLDELMLQWSNGKHSNGNEMEVLESLEPHKDLKRLTVEYYNGASFPNWLGDKSYWDLQLVDLRHCENCNSLPTLGMLPFLKDLFIEGFTQVSSIGAEFYGVATASQKPFQSLERLQFQDMLEWKEWSILEGIEFPCLVELYIIRCPKLVRDLPKQVLSLEKLEIFGCYALEAPLPKVSDKCQVFVHDSNDIVMRNIAKTHSQPSLRRVKISEEVHEITVQSFSGFPSTKYTVGSSLGEIEEIAHEERMESESTRSRWPLDSSSSDTLRIPKLKETSSRIISHQVEANIPNIKQQKDPQSSDTKFDTPITTQAAIKVETSSKEDLDDQRSSFEMLKISTVSQLKSLPTKLHSLKVEGCESLESLPNDLLEGITTLEELYLISCSSLRSLPSLGSVTTLYIRNCRRLENLPSLESRKQLACLHHLFIGSSCDSLTSLTLDLFPKLKILCIWDCLNLQSFNVTKEYKGDLPSLESLEIRDCPGLMSFPEGGIHAPNLESIFLSNCKNLNNLPDAMNSLTSLRTLFLHKCPEIECIPYGGLPSSLILLSIAYCDKLTPQKNWRLDTLESLNRLELEGGCIGMDSFPEDMILPPNINSLCISTLKSLKKLNYSGFQHLNALQTLEIHCCGMLCSLPDQGLPSSLNQLCVQECPLLTPRLKPNSGKERHKVARIPHIQIDHQILYWNQCQS	1401

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu03g00921	1401	SUPERFAMILY	L domain-like	1053	1368	-	-
	Adu03g00921	1401	Pfam	NB-ARC domain	180	398	IPR002182	GO:0043531
	Adu03g00921	1401	Gene3D	-	163	318	IPR027417	-
	Adu03g00921	1401	Gene3D	-	416	508	IPR036388	-
	Adu03g00921	1401	MobiDBLite	consensus disorder prediction	961	981	-	-
	Adu03g00921	1401	Gene3D	Ribonuclease Inhibitor	1038	1131	IPR032675	-
	Adu03g00921	1401	Gene3D	Ribonuclease Inhibitor	1132	1369	IPR032675	-
	Adu03g00921	1401	Gene3D	-	335	407	IPR042197	-
	Adu03g00921	1401	Gene3D	-	10	121	-	-
	Adu03g00921	1401	Gene3D	Ribonuclease Inhibitor	561	932	IPR032675	-
	Adu03g00921	1401	SUPERFAMILY	L domain-like	498	881	-	-
	Adu03g00921	1401	PRINTS	Disease resistance protein signature	197	212	-	-
	Adu03g00921	1401	PRINTS	Disease resistance protein signature	270	284	-	-
	Adu03g00921	1401	PRINTS	Disease resistance protein signature	371	385	-	-
	Adu03g00921	1401	PRINTS	Disease resistance protein signature	614	630	-	-
	Adu03g00921	1401	PANTHER	OS05G0414200 PROTEIN	29	929	-	-
	Adu03g00921	1401	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	163	434	IPR027417	-
	Adu03g00921	1401	PANTHER	DISEASE RESISTANCE PROTEIN RP	29	929	IPR044974	GO:0006952
	Adu03g00921	1401	Pfam	Rx N-terminal domain	13	100	IPR041118	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu03g00921	Adu-Chr3	9262367	9266572	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu03g00921	567	669	WRKY Transcription Factor Family	AT4G12020	33.654	4.19e-06	49.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu03g00921	-		-	aip:107629658	2682.13