Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00918 ATGGAGCAATTCACAAGCCAACCTCTTTCGTCTTCGAGCAAGAAGGATGATAGAAGGCTCATAGAGAGCCATAGAAGGATCCTGATGAAGAACCTCTACTCCAAACTCAACTCTCTTCAACCTAATTCTAACACCAAGAAAGCGTTGCCGGATCAACTGGATGAAGCCATCAACTACATAAAGAGCTTAGAGGAGAAGGTGAAGATGGCTGAGGACAAGAAACAGTCCTTATTGTTCATCTTCCATGAGATCATTCGCGTGCTGCACGAAGATCACCACATCAATTTCGTGCACTCAGGGCTTATAGCCAAGCTCATGGACAAGCTATTGATCCTTGACGATCTCATAGAGAAGTTGCAGTTTTCAGAAGGAGAAAGAGGAGACAAAGCTGATGAGAAATTGAAATGGTTACATCTAATGCAAGATGTTGTTCGTTTGGAAGAACATCATCTTTTGCAGAAAAATTCTATGAGTTTGCAGAAGCTACTGAAGCGTTTCAAGTCTCAAATATGTCAAATCCTTTACTTCATTCTCATGAAGGGAAAGAAGGATAATGTTGTCCTTGCCCTTGCCATTGGCAAAGCAGAAGACCTTCATACTCTGCCAGAATTACCTTTATCTTATGTCAAAGATTGCTTATATGGCAGAGGTGAAGAAGAGAAGTATATGCTGAAAAGCCTACTATCATCAAGTGAACAGCAAAAACAGATCAAGGTGATTAGCATAGTGGGAAAATCCGGGGTAGGCAAGACTTCATTGGCTGATGTTGTTTACTTCAACCCCAAGGTTTTGGAGTGTTTTGATCTTAGAGCTTGGGTTACTTTTCCCCACAAAGTCACTGCTACCTTCGTTGCAAAGAAAATTCTTGAGGAACTAGTTACTGATGATGATGGGGAAGAGGAGCTTGTTCCCGGTGATGATTTTGATAACTTGAAGAAGAGATTTGCTGGGAAGAAACTTCTGCTGGTATTAGATGATATTATGGTTGAAGATGATGGCTTGCACAAGTGGGACATGTTAATTGCTTCCCTTGAATCTGCAGCAGCAAGAGGGAGTGCCATAATGCTAACCTCTATTCCCCATGACAATCCAGAACTACTCATGATACCTGCTTGTCATACTGTGCATCTTGATTCGCTGTCAGCGGAGGATGCGCTGTCAGTCTTCTTGGTGCATGCTTCTTCTGGGCAGACGGACCTTCACGAACACCCTGGGGAGTTAGCAGCAGTTGGCAAGGAAATCGTTGGAAAATTGGGAAACCTTCCCTTGGCTGCAAAAATGATAGGGAGCCTCTTTCAAGATAAGCGAAATCCGGATCAATGGGTTGAGATATTGAGGAGTGAATTTCTGGATGCAGGCCATGCAAATCTCATCCCAATTCCTCCATTTCTAGTACTATGCTACCTTGATCTCCCTGCGCGGATCAAACAATGCTTTCTTCATTTGTCACTATTTCCAAAGGGTTATCAATTAAAGCGGAAGCAGGTGGTCAACTTGTGGATAGCCGAGGGCTTTGTGGAAATCCCTGATTTTCAATCAAGTTTTAAGAGCTCTGAAGACATTGGTAATGCATACTTCAGTTATCTAGTAATGAGGTCATTTTTGCAGCCCGTTCGGTCTAGTGTTAGTTTTATAATGCATAATCTGGTTCATGACTTAGCAACCTACATGGTAGAGAAGTTAAACGATTGCCATTTATCCTCTAATCAAAGCACAGACGGAATAAGCAATTTGATAAACTTGCTCCACCTTGATATGAAAGGTAGCAGTGTGCAAGGAATGCCTTTGAAATTTCCTGAATTTACAAGATTAGAAAAGTTAGCAAGGATGGAAGAAACTACTAGGAGTGAGTTTGAAGAAATTCCTGACGAAGCAAAGATGGAAACTGAATCCATAAGAAGGAGATTGCCACTTCATTTGTCAGCCTCAGATATACCCAGTTTGAAGAGAACTGATATTCCCAGTTTTGAACAGCAAATAGACCCAAAATCTTCAATGGCTAAAGCTGAGATTCCAGCGAGCATAAAACAAGAAGCTGTCCTTCCTCTTATGGATACACCTAACACAACTGCTCCTGTCAAGGTAGAAGCTTTAACCAGAGAAGATTTGGATGATGACAAACCATCCTTCAAAGTATTAAGGGTTTCAACTATATCACAATTCAAGTCCTTGCCTGCCAATCTGCACAGCCTAAAAATTGAAGGGTGTGAATCCTTGGAGGTCGTTCCAGATGATTTATTAGGGGGAATAACTACTCTTAAGCAGTTGTATCTAATCAGTTGTTCTTCTCTTAGATCCTTTCCTTACCCCGGTTCCTTGACATCACTTTACATCCGTAACTGCAGAAGATTGGAATTTCTCCCATCTGCAGTATCAAGAAAGAGGCTTCCCTTTCTCCATCATTTGTCCATAGGGAGTAGCTGTGATTCTGTCACTACCTTGCCCTTAAATATCTTTTGTCAACTCAAAAGTCTTTGTATATGGGATTGCCTCAATCTTGGATCGTTTCATTTTACTGGGGAACCTAGAGGTGATCTTACATCTCTGGAGTCACTAGAGATTAGAGAGTGCCCAATATTGGAATCTTTCCCAGAGGAAGGGCTGCATGCTCCAAGGCTAGCATCCATTTTACTTTCCAACTGCAAGAATCTTAAAAAATTGCCAAATGCTATGAACTCTCTCGTATCACTCAAGTCATTATTTTTACATAGATGTCCACAGATTGAATCTTTTCCGCTTGGGGGATTGCCTTCCAATTTGGTTTTTCTATCCATAGCTTACTGTGACAAACTTACACCACAAAAAGATTGGGGGCTGTACAGTCTTGAGTGTCTCAGTTATTTTGAGCTTGAAGGTGGATGCATAGGCATGGAATCATTTCCAGAGGAGAATTTACTACCTTGCAATATCATCTCTTTACACATAAGCACATTGAAGAGTCTCAAGATTCTGGACTGCAAGGGGTTTCAACACCTGAATGCTCTTCAGACACTTGAAATTCATTGCTGTGACATGCTTCAATCCTTGTCCAATCACGGGCTTCCTTCGTCCCTGGAGAAANNNNNNNNNNNTGTTGACTCTTAA 3084 0.4141 MEQFTSQPLSSSSKKDDRRLIESHRRILMKNLYSKLNSLQPNSNTKKALPDQLDEAINYIKSLEEKVKMAEDKKQSLLFIFHEIIRVLHEDHHINFVHSGLIAKLMDKLLILDDLIEKLQFSEGERGDKADEKLKWLHLMQDVVRLEEHHLLQKNSMSLQKLLKRFKSQICQILYFILMKGKKDNVVLALAIGKAEDLHTLPELPLSYVKDCLYGRGEEEKYMLKSLLSSSEQQKQIKVISIVGKSGVGKTSLADVVYFNPKVLECFDLRAWVTFPHKVTATFVAKKILEELVTDDDGEEELVPGDDFDNLKKRFAGKKLLLVLDDIMVEDDGLHKWDMLIASLESAAARGSAIMLTSIPHDNPELLMIPACHTVHLDSLSAEDALSVFLVHASSGQTDLHEHPGELAAVGKEIVGKLGNLPLAAKMIGSLFQDKRNPDQWVEILRSEFLDAGHANLIPIPPFLVLCYLDLPARIKQCFLHLSLFPKGYQLKRKQVVNLWIAEGFVEIPDFQSSFKSSEDIGNAYFSYLVMRSFLQPVRSSVSFIMHNLVHDLATYMVEKLNDCHLSSNQSTDGISNLINLLHLDMKGSSVQGMPLKFPEFTRLEKLARMEETTRSEFEEIPDEAKMETESIRRRLPLHLSASDIPSLKRTDIPSFEQQIDPKSSMAKAEIPASIKQEAVLPLMDTPNTTAPVKVEALTREDLDDDKPSFKVLRVSTISQFKSLPANLHSLKIEGCESLEVVPDDLLGGITTLKQLYLISCSSLRSFPYPGSLTSLYIRNCRRLEFLPSAVSRKRLPFLHHLSIGSSCDSVTTLPLNIFCQLKSLCIWDCLNLGSFHFTGEPRGDLTSLESLEIRECPILESFPEEGLHAPRLASILLSNCKNLKKLPNAMNSLVSLKSLFLHRCPQIESFPLGGLPSNLVFLSIAYCDKLTPQKDWGLYSLECLSYFELEGGCIGMESFPEENLLPCNIISLHISTLKSLKILDCKGFQHLNALQTLEIHCCDMLQSLSNHGLPSSLEKXXXXVDS 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00918 1027 Gene3D Ribonuclease Inhibitor 711 866 IPR032675 -
Adu03g00918 1027 PANTHER OS05G0492600 PROTEIN 126 1012 - -
Adu03g00918 1027 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 13 86 IPR036638 GO:0046983
Adu03g00918 1027 PRINTS Disease resistance protein signature 239 254 - -
Adu03g00918 1027 PRINTS Disease resistance protein signature 976 992 - -
Adu03g00918 1027 PRINTS Disease resistance protein signature 418 432 - -
Adu03g00918 1027 PRINTS Disease resistance protein signature 314 328 - -
Adu03g00918 1027 Pfam NB-ARC domain 228 445 IPR002182 GO:0043531
Adu03g00918 1027 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 63 IPR011598 GO:0046983
Adu03g00918 1027 SUPERFAMILY L domain-like 541 1020 - -
Adu03g00918 1027 Gene3D - 200 362 IPR027417 -
Adu03g00918 1027 Gene3D - 7 89 IPR036638 GO:0046983
Adu03g00918 1027 PANTHER DISEASE RESISTANCE PROTEIN RP 126 1012 IPR044974 GO:0006952
Adu03g00918 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 482 IPR027417 -
Adu03g00918 1027 Gene3D Ribonuclease Inhibitor 882 1022 IPR032675 -
Adu03g00918 1027 Gene3D - 379 452 IPR042197 -
Adu03g00918 1027 Gene3D - 464 556 IPR036388 -
Adu03g00918 1027 Coils Coil 53 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00918 Adu-Chr3 9218388 9221680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00918 10 78 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 43.662 1.23e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00918 - - ahf:112737308 1895.94