Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00915 ATGGAGAGGTACCTCAGAGACAACTTTTACGTTCAGCCCAAGCGCCCTACCTCCGACGCCCTCCGCCGATGGAGGTCCGCCGTCGCCGTCGTCAAGAACCCCCGCCGCCGATTCCGTATGGTCGCCAATCTCGCCCAACGCGCCGAAGCCGAACAGAAGCGCAAGAAGAGTCAGGAAAAGGTCAGGGTGGCTCTCTATGTGCAAAAAGCAGCATTGCAATTCATTAGCGCTGGAAACCGTAGTTCTGAGTACATGCTCTCCAAAGAGGTACAAGAAGCGGGTTTTGGAATTGAGCCAGATGAATTAGCGGAAATTGTTCATTCCCATGACACCAAATCTTTGGAGCGCAATGAAGGAGTTGAAGGTTTAGCTAAGCGTGTTTGTGTGTCTCTTCAAGATGGTATTCATTCACAAGATATTTCACACAGACAGAAGATCTTCGGTTGTAATCAGTACACAGAGAAGCCGCAAAGAAGCTTCTGGATGTTTGTTTGGGATGCAATGCAAGACTTGACACTCATGATCCTCATTGTCTGTGCTGTGATTTCAGTAGGTGTTGGAATATCAACGGAAGGTTTTCCAAAAGGTATGTATGATGGAGTTGGAATTATACTTTGCATTCTGTTAGTGGTATTTGTCACTTCAATCAGTGACTACAGACAGAGTTTGCAATTCAAAGATTTGGATAAAGAAAAGAAGAATGTCAGAATCCAAGTCACAAGAGAGGGTAAAAGACAGAAGGTTTCGATTTATGAACTTGTGGTGGGAGACATAGTTCATCTTTCAATAGGAGATGTAATCCCTGCAGATGGAATTTTCATATCAGGTTTCAGCTTGTTGATTGATGAATCAAGCTTATCTGGTGAGAGTGAAGCAGTGCATGTTGATCATGAGAAGCCTTTTCTTCTATCAGGGACATCCGTTCAAGATGGTTCTGCAAAGATGCTAGTGACTTCTGTTGGTATGAGAACTGAATGGGGAAAACTGATGGATACTTTGAATGAAGGAGGTGATGACGAGACACCACTTCAGGTCAAGCTCAATGGTGTTGCCACAATTATAGGAAAGATAGGACTTGGTTTTGCAGTCCTAACATTCCTGGTTTTGACTGGAAGGTACTTGTTGGAGAAAGTAAAACATCATGAGATTGCTCATTGGTCCATGGATGATGCATCAAAGCTTCTCAATTTCTTTGCCACTGCTGTGATCATAATTGTTGTGGCAGTTCCTGAGGGACTTCCTTTGGCAGTCACACTAAGCCTTGCGTTTGCAATGAAGAAACTTATGAATGATAAGGCACTTGTAAGGCACCTTTCGGCATGCGAAACGATGGGCTCGGCCGGCTGTATCTGCACGGATAAGACAGGAACCTTGACGACAAATCACATGGTTGTTGACAAGTTATGGATATGTGAACAAACTAAGGCAATAAAAAAGGGTGATGGTGAGAGTGTCTTGAAGAATTTTGTTCCTGAAGAGATATTTGATCTCTTTCTGCAGTCTATATTTCAGAACACAGGCTCTGAGATTGTCAAAGGGGAAGATGGTAAGAACAAGGTCATGGGAACTCCCACGGAAACGGCATTGTTGGAATGCGGATTGATGTTGGGAGGTGATTCTAAATCTTACAATGACAAGTACAAGATAATGAAGGTTGAGCCTTTCAATTCTGAGAAAAAAAAGATGTCTGTGCTTGTGGCCCTTCCTGATGGCACCATCAACAAGTCTAGAGCATTTTGTAAAGGAGCATCAGAAATAGTTCTCAAGAATTGTAACAAGGTTATTAATGCAGATGGGAAAGTGGTGGATTTGAATGAAGAACAGAGAAAGTGCATCATAGAAGTAATAGATGGTTTTGCTTGTGAGGCTCTGGAGGATAACTACACATTCGTAGCAATTATTGGAATCAAGGATCCAGTGAGACCTGGAGTTAAAGAAGCTGTGAAGACTTGTTTAGAAGCTGGAATCAATGTTAGAATGGTAACTGGTGATAACATAAACACTGCTAAAGCCATTGCTAAAGAATGTGGCATCTTGACAGATGGAATTGCTATTGAGGGACCAGAATTCAGGAATAAAAGCCAGCAGGAGTTGGAGGAGATCATACCAAAACTCCAGGTGATGGCTAGGTCCCTGCCTCTTGACAAGCACAAATTAGTAACCCATTTGAGGAATGATTTTAATGAAGTTGTGGCAGTGACAGGTGATGGGACCAATGATGCTCCAGCATTACATGAGGCTGATATTGGACTCGCCATGGGTATTGCAGGGACAGAGGTTGCAAAAGAGAATGCGGATGTGATTGTAATGGACGACAACTTTGCCACCATAGTGAATGTTGCCAAATGGGGTCGTTCTGTTTATATAAACATACAAAAGTTTGTTCAGTTCCAATTAACAGTCAACGTTGTAGCTCTCATGCTAAATTTTGTTTCAGCATGTGTCTCAGGCTCTGCTCCTCTTACCGCTGTTCAAATGCTTTGGGTGAACATGATCATGGACACACTTGGCGCATTGGCATTGGCTACTGAACCTCCCCATGGTGGACTCATGAAGAGGCCACCTATTGGAAAGGACACCAAATTCATAACCCCTGTCATGTGGAGGAACATAATTGGTCAGAGTATTTATCAAACTATTGTCCTGTTGCTACTCAAATTTCGCGGCAAGCAGATTCTCAAGCTCAGTGATTCTGATTCTACCCTACTCAATACTGTCATATTCAACGCCTTTGTATTTTGCCAGGTGTTCAACGAGATAAATAGCCGTGACATGGAAAAGATAAATGTTGTAAGAGGCATGTTGAGCAGCTGGGTATTCCTTGTGGTGATAGCATCAACAGTAACATTTCAAGTGGTAATAGTTGAGTTTTTAGGAACATTTGCACAAACAGTGCCACTGAGTAAGGACTTGTGGTTATTCAGCGTGTTAATTGGTGCGGTTAGTTTAGTGATAGCTGTTGTCCTAAAATGCATTCCTGTTGGTACCACTGACTCCCATTATCAACCTGCTTCTCATGATGGCTACGAGCAGCTACCAAGTGGACCTGACATGGCATGA 3060 0.4304 MERYLRDNFYVQPKRPTSDALRRWRSAVAVVKNPRRRFRMVANLAQRAEAEQKRKKSQEKVRVALYVQKAALQFISAGNRSSEYMLSKEVQEAGFGIEPDELAEIVHSHDTKSLERNEGVEGLAKRVCVSLQDGIHSQDISHRQKIFGCNQYTEKPQRSFWMFVWDAMQDLTLMILIVCAVISVGVGISTEGFPKGMYDGVGIILCILLVVFVTSISDYRQSLQFKDLDKEKKNVRIQVTREGKRQKVSIYELVVGDIVHLSIGDVIPADGIFISGFSLLIDESSLSGESEAVHVDHEKPFLLSGTSVQDGSAKMLVTSVGMRTEWGKLMDTLNEGGDDETPLQVKLNGVATIIGKIGLGFAVLTFLVLTGRYLLEKVKHHEIAHWSMDDASKLLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGCICTDKTGTLTTNHMVVDKLWICEQTKAIKKGDGESVLKNFVPEEIFDLFLQSIFQNTGSEIVKGEDGKNKVMGTPTETALLECGLMLGGDSKSYNDKYKIMKVEPFNSEKKKMSVLVALPDGTINKSRAFCKGASEIVLKNCNKVINADGKVVDLNEEQRKCIIEVIDGFACEALEDNYTFVAIIGIKDPVRPGVKEAVKTCLEAGINVRMVTGDNINTAKAIAKECGILTDGIAIEGPEFRNKSQQELEEIIPKLQVMARSLPLDKHKLVTHLRNDFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIVMDDNFATIVNVAKWGRSVYINIQKFVQFQLTVNVVALMLNFVSACVSGSAPLTAVQMLWVNMIMDTLGALALATEPPHGGLMKRPPIGKDTKFITPVMWRNIIGQSIYQTIVLLLLKFRGKQILKLSDSDSTLLNTVIFNAFVFCQVFNEINSRDMEKINVVRGMLSSWVFLVVIASTVTFQVVIVEFLGTFAQTVPLSKDLWLFSVLIGAVSLVIAVVLKCIPVGTTDSHYQPASHDGYEQLPSGPDMA 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00915 1019 Gene3D - 464 637 IPR023299 GO:0000166
Adu03g00915 1019 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 203 476 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu03g00915 1019 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 700 822 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu03g00915 1019 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 548 680 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu03g00915 1019 SFLD C1.7: P-type atpase like 433 786 - -
Adu03g00915 1019 PANTHER CALCIUM-TRANSPORTING ATPASE 3 1002 - -
Adu03g00915 1019 Gene3D - 638 750 IPR023214 -
Adu03g00915 1019 Pfam Cation transporting ATPase, C-terminus 819 991 IPR006068 -
Adu03g00915 1019 Gene3D - 17 76 - -
Adu03g00915 1019 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Adu03g00915 1019 PRINTS Sodium/potassium-transporting ATPase signature 201 221 - -
Adu03g00915 1019 PRINTS Sodium/potassium-transporting ATPase signature 444 465 - -
Adu03g00915 1019 PRINTS Sodium/potassium-transporting ATPase signature 578 596 - -
Adu03g00915 1019 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 109 994 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Adu03g00915 1019 SUPERFAMILY HAD-like 450 839 IPR036412 -
Adu03g00915 1019 PANTHER CATION TRANSPORTING ATPASE 3 1002 - -
Adu03g00915 1019 SUPERFAMILY Calcium ATPase, transduction domain A 236 332 IPR008250 -
Adu03g00915 1019 SUPERFAMILY Calcium ATPase, transmembrane domain M 118 993 IPR023298 -
Adu03g00915 1019 Coils Coil 41 61 - -
Adu03g00915 1019 PRINTS P-type cation-transporting ATPase superfamily signature 282 296 - -
Adu03g00915 1019 PRINTS P-type cation-transporting ATPase superfamily signature 451 465 - -
Adu03g00915 1019 PRINTS P-type cation-transporting ATPase superfamily signature 632 643 - -
Adu03g00915 1019 PRINTS P-type cation-transporting ATPase superfamily signature 654 664 - -
Adu03g00915 1019 PRINTS P-type cation-transporting ATPase superfamily signature 734 753 - -
Adu03g00915 1019 PRINTS P-type cation-transporting ATPase superfamily signature 758 770 - -
Adu03g00915 1019 SFLD p-type atpase 433 786 IPR044492 -
Adu03g00915 1019 Gene3D - 751 993 - -
Adu03g00915 1019 ProSitePatterns E1-E2 ATPases phosphorylation site. 453 459 IPR018303 -
Adu03g00915 1019 CDD P-type_ATPase_Ca_PMCA-like 140 867 - -
Adu03g00915 1019 SMART Cation_ATPase_N_a_2 93 188 IPR004014 -
Adu03g00915 1019 MobiDBLite consensus disorder prediction 1000 1019 - -
Adu03g00915 1019 Pfam Cation transporter/ATPase, N-terminus 117 183 IPR004014 -
Adu03g00915 1019 Pfam E1-E2 ATPase 236 429 - -
Adu03g00915 1019 Pfam haloacid dehalogenase-like hydrolase 449 748 - -
Adu03g00915 1019 Gene3D - 124 331 - -
Adu03g00915 1019 Gene3D - 332 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00915 Adu-Chr3 9146220 9152381 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00915 59 1016 Primary Pumps ATPases AT3G57330 68.539 0.0 1349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00915 K01537 - gmx:100801260 1637.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00915 03 9146220 9152381 Adu03g00915 03 9146220 9152381 ECH