Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00908 ATGGACTCAGGTTCACCATACCAATGGATAAGGGAGCTGAGATTTGAAGACAGCAACACCTTAAATCCATTTGATCTTCTTTACGAATGTGCCAAATTTGTTGCATCAGGAAGCATAAAAAATGCAGACATAGCACTTGAATACATCTCTCACCAGTTGTCTCCGGACGGCGCAGCAGCGCAGCGCACGGTGACTTATTTCAGCGAAGCTCTGGCTTCCAAGATAGTCAAGAATCTTCCAGGAGTAGACAAAGCTCTAAACTCCTCAAAGAGATTAACTGCTCCTGAAGAAATCCTTGTCCAGAACTACTTCTATGAGTTGTTTCCTTTTCTGAAATGTGCTTACTTGACTGCAAATCAAGTCATAGTTAAAGCGATGGAAGGCGAAAAAATTGTCCATATAATTGATCTGCATTGTGCAGAGCCGGTTCAATGGATTAACCTCTTGATGACATTGAATGAGCGTCCTGAAGGACCTCCTCATTTGAGGATCACAAGCATTCATGATAAGAAAGAGGTTTTAGATCAGATGAATGCTAGTTTGACAAGAGAAGCAGAGAAATTGGATTTTCCTTTGCAGTTCAATCCTATAGTTAGCACTTTAGAAGACCTTGACATTGATAGTTTGCCGGTTCGCACAGGCGAGGCGCTTGCAATTTGTTCTGTCTTGCAGCTGCATCGCCTTCTAGCCACAGATGATGAAGTTCTAGGGAGGAATTCCCCGGCTGCAACGATGAATCTGCATAGAGCAGTGCATATGAACCGAAGAACTTTCGCAGAGTGGCTCGAAAGAGATATGATGAATTCATATATTTCAAGTCCTATCTCTGCTTTGTCACCTCCTCCTCTGTATCCTTCACCTAAGATGGAGGCATTTTTAAGAGATCTTCGCAAACTGCAGCCAAAATTAATGGTGATAACTGAGCAAGAGACTAATCTTAATGGATGCAGTCTTGTGGAGAGAGTTGAGAAAGCTTTATACTTCTACAGTGCCTTGTTTGATTGCTTGGATTCGACCGTGCGAAGAACTTCCTTGGAGAGGAAGAAAGTTGAGAGTTTGCTGCTTGGAGAGCAGATAAAGAACATCATTGCATCTGAGGGGTTTGAGAGAAAGGAGAGGTATGAGAAGCTTGAGAATTGGATTCGGCGGCTCGATCTGGCCGGTTTTGTGAGGCTGCCTTTGAGAGACAATGATAACTTGCATGCTAAGGAGGTTTTGCACAACTATGGACACAAATATATGATTAGAGAAGGCCATGGTTGCTTACTTGTTTGTTGGGGTGATAGACCCCTTTTCTCCATTTCAGCATGGAGTTTTAGAGGATTAAATCTTTCTTTATAA 1341 0.4258 MDSGSPYQWIRELRFEDSNTLNPFDLLYECAKFVASGSIKNADIALEYISHQLSPDGAAAQRTVTYFSEALASKIVKNLPGVDKALNSSKRLTAPEEILVQNYFYELFPFLKCAYLTANQVIVKAMEGEKIVHIIDLHCAEPVQWINLLMTLNERPEGPPHLRITSIHDKKEVLDQMNASLTREAEKLDFPLQFNPIVSTLEDLDIDSLPVRTGEALAICSVLQLHRLLATDDEVLGRNSPAATMNLHRAVHMNRRTFAEWLERDMMNSYISSPISALSPPPLYPSPKMEAFLRDLRKLQPKLMVITEQETNLNGCSLVERVEKALYFYSALFDCLDSTVRRTSLERKKVESLLLGEQIKNIIASEGFERKERYEKLENWIRRLDLAGFVRLPLRDNDNLHAKEVLHNYGHKYMIREGHGCLLVCWGDRPLFSISAWSFRGLNLSL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00908 446 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 440 IPR005202 -
Adu03g00908 446 Pfam GRAS domain family 25 437 IPR005202 -
Adu03g00908 446 ProSiteProfiles GRAS family profile. 14 438 IPR005202 -
Adu03g00908 446 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 4 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00908 Adu-Chr3 9039026 9040790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00908 1 440 GRAS Transcription Factor Family AT1G50420 49.556 7.64e-147 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu03g00908 GRAS 6.4e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00908 - - gmx:100779726 585.104