LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu03g00903	ATGGCTAACAATGTCACTAACCGGTTCCATCAATCTCTCACTCGAAATGCTCTTCGCTCTTATCTCGCCGAGTTCATGTCCACTTTCTTCTATGTTCTTGCCGTTGTTGGTTCTGGAATGTCCGCACGGAAATTGATGCCTGATGCAACACTGAATCCGGCTACCCTTGTTGTGGTTGCCATTGCAAACGCTTTCGCCTTGTCGTCCGTGTTGTACACCGCATGGGATATCTCCGGTGGACACGTCAACCCGGCGATTACGTTTGCAATGGCAATAGGAGGCCATGTTAGTGTACCAACCGCTCTCTTTTATTGGGTTGCCCAACTTATAGCCTCTGTTATGGCTTGCCTTGTCCTTAGGGTCATCCTTGTTGGAATGCATGTTCCGACATACACAATTGCTGAAGAAATGACAGGGTTTGGAGCATCGGTACTAGAAGGTTTCTTGACATTTGTATTGGTGTACACAGTTTATGCAGCAAGGGACCCAAGGCGTGGTCCATTGAGTGCTACAGGACCAGTCGTAATTGGACTCATGGCCGGTGCAAATGTGTTAGCCGCAGGTCCTTTCTCTGGAGGCTCAATGAACCCAGCATGTGCTTTCGGCTCTGCAGCCATTGGTGGCAGTTTCAGGAACCAAGCCGTGTATTGGGTTGGTCCCTTGCTTGGTGCTGCCGTGGCTGGCCTTCTCTATGACAATGTAGTCTTCCCAGTAACCGCAACAACTGGAGTTTCTGATGGACTTACTGTGTGA	753	0.4954	MANNVTNRFHQSLTRNALRSYLAEFMSTFFYVLAVVGSGMSARKLMPDATLNPATLVVVAIANAFALSSVLYTAWDISGGHVNPAITFAMAIGGHVSVPTALFYWVAQLIASVMACLVLRVILVGMHVPTYTIAEEMTGFGASVLEGFLTFVLVYTVYAARDPRRGPLSATGPVVIGLMAGANVLAAGPFSGGSMNPACAFGSAAIGGSFRNQAVYWVGPLLGAAVAGLLYDNVVFPVTATTGVSDGLTV	250

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu03g00903	250	Gene3D	Glycerol uptake facilitator protein.	3	243	IPR023271	-
	Adu03g00903	250	PRINTS	Major intrinsic protein family signature	19	38	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Adu03g00903	250	PRINTS	Major intrinsic protein family signature	63	87	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Adu03g00903	250	PRINTS	Major intrinsic protein family signature	100	119	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Adu03g00903	250	PRINTS	Major intrinsic protein family signature	145	163	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Adu03g00903	250	PRINTS	Major intrinsic protein family signature	177	199	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Adu03g00903	250	PRINTS	Major intrinsic protein family signature	214	234	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Adu03g00903	250	Pfam	Major intrinsic protein	16	231	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Adu03g00903	250	ProSitePatterns	MIP family signature.	81	89	IPR022357	-
	Adu03g00903	250	PANTHER	AQUAPORIN-8	4	242	IPR034294	-
	Adu03g00903	250	PANTHER	AQUAPORIN TIP5-1-RELATED	4	242	-	-
	Adu03g00903	250	SUPERFAMILY	Aquaporin-like	10	238	IPR023271	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu03g00903	Adu-Chr3	8961060	8962858	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu03g00903	6	247	Major Intrinsic Protein MIP	AT3G47440	66.529	7.68e-114	325

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu03g00903	K09873		-	gmx:100801448	394.045

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu03g00903	03	8961060	8962858	Adu03g00903	03	8961060	8962858	ECH